PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG057810.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 600aa    MW: 67002.8 Da    PI: 7.8094
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG057810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.95.7e-066079525
                      --SGGGGTS--TTTTT-SS-S CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaH 25
                      +C+ +   G+C+ G++C++ H
  TRIDC7BG057810.1 60 ECNMYKM-GFCPNGPNCRYKH 79
                      6666666.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    
SYRQTVCRHW LRGLCMKGEA CGFLHQFDKA RMPVCRFFRD YGECREPDCA YKHSYDDVKE  60
CNMYKMGFCP NGPNCRYKHA KLPGPPPPVE EVLAKIMQMR SSNFNKFNQH RNNNYNQQGD  120
RPRPPPGSGL PNQNSTDNAS TMQPAAGQQV QTMNQQPQQK QQQVQQQQQQ KPNTNDQVQG  180
VPNGSSNQPT RLATPLPQGS SRYFIVKSCN RENLEISVQQ GIWATQRSNE AKLNEAFESM  240
DNVILIFSIN RTRNFQGCAK MTSRIGGYIG GGNWKSANGT AHYGRNFSLQ WLKLCELSFQ  300
KTHHLRNPYN DNLPVKISRD CQELEPFIGE QLASLLYLES DSELTAMLVA AEAKREEEKA  360
KGVSADEAAD NQDIVLFEDN EEEEEEESEE EDENNGQESQ GRGRGRGMMW PPQMQMPRGP  420
MMGPRGFPPN MMGDFGGGFG FGMPDPFGMP RGFPPFGGPR FPGDFPRGPM PGMVFPGRPP  480
QPGGMFPMGL EMMMGPGRGP LMGMGGPGRP NRPIGMAPFM PPPPPRPAKR DQRRPGGDNN  540
RGDRYETGSD QGSRGHDNNA GNSGADGNRS QSGDRFGRSA FRDDDSESDE EAAPRRSRKR