PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG057210.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 329aa MW: 36006.8 Da PI: 11.7904

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG057210.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.5e-16	27	74	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+ l+d v+++G g+W+++ r+ g+ R++k+c++rw ++l TRIDC7BG057210.2 27 KGPWTQAEDQVLLDHVRRHGEGNWNAVRRETGLQRCGKSCRLRWANHL 74 79******************************************9986 PP
2	Myb_DNA-binding	47.4	4.3e-15	80	123	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+ l+++++ + G++ W++I+ +++ gRt++++k++w++ TRIDC7BG057210.2 80 KGPFSPEEERLILRLHGLIGNK-WARISTHLP-GRTDNEVKNFWNT 123 79******************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
AEMATAMDTT MPRSGVGEGG GGGGLKKGPW TQAEDQVLLD HVRRHGEGNW NAVRRETGLQ 60 RCGKSCRLRW ANHLRPNLRK GPFSPEEERL ILRLHGLIGN KWARISTHLP GRTDNEVKNF 120 WNTRLKRRQR AGQSLYPPDV EREIALMRAQ NINPFADADG NTVASPFLGP FALPPRPPSS 180 TKPASHSHSH SSPLINQHYQ LLNQMQGMQM RHHAVQHHHQ QPAFHHHGGI RSPGSRRCRP 240 GRGSSLRTKS RWRAAAAAAT ACWRLCCSAS TNINSPVQTM PCAGRAPCPI SCTAASRAGA 300 TATSPRSSLP LPEARTRTMA GNGTSSSMT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	1e-57	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG057210.2