PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG055320.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 676aa MW: 73314.4 Da PI: 7.8506

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG055320.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.9	2.2e-24	124	225	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f k+lt+sd+++ g +++p+ +ae++ ++ + t+ +d +g +W++++iyr++++r++lt+GW++Fv++++L +gD++vF+ + TRIDC7BG055320.2 124 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFM--R 212 89**************************996555555..8999*****************************************..4 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 ++++ l+v+++r+ TRIDC7BG055320.2 213 TENGDLCVGIRRA 225 588999**997 PP
2	Auxin_resp	118.2	6.8e-39	283	366	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 aa+ a+++++F+v+Y+Prast+eF+v+++ v++a+++++++GmRfkmafetedss++++ +Gtv++v+ +dp+rWpnS+Wr+L+ TRIDC7BG055320.2 283 AANLAASGQPFDVLYYPRASTPEFCVRAAAVRAAMRTQWCPGMRFKMAFETEDSSRISWfMGTVSAVQVADPIRWPNSPWRLLQ 366 7899******************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
MITFVDSAAG ERERGEGPRC LDPQLWHACA GGMVQMPPPG SRVYYFPQGH AEHAQGQAGA 60 VDFPPGARLQ ALVLCRVAAV RFMADPDTDE VFAKIRLVPA RPQDDADDAI AAAAAGQEDK 120 PASFAKTLTQ SDANNGGGFS VPRYCAETIF PRLDYSADPP VQTVLAKDVH GVVWKFRHIY 180 RGTPRRHLLT TGWSSFVNQK KLVAGDSIVF MRTENGDLCV GIRRAKKGGI GGPELLPPPP 240 PAATGNYGGF SMFLRGEEDG GNKMMGARGK VKVRVRPEEV AEAANLAASG QPFDVLYYPR 300 ASTPEFCVRA AAVRAAMRTQ WCPGMRFKMA FETEDSSRIS WFMGTVSAVQ VADPIRWPNS 360 PWRLLQVTWD EPDLLQNVKR VSPWLVELVS NMPAIHLAPF SPPRKKLCVP FYPDLPVDGQ 420 FPAPMFHGNP LGRGGVGPMC YFPDGTPAGI QGARHAQFGI SLSDLHLNKL QSSLSPHGLH 480 QVDHGGQPRI AAGLIIGHPA ARDDISCMLT IGNHQSNNKS DVKKASPQLM LFGKPILTEQ 540 QITLGNSGGF SPSAARKSSS EMSAEKSANN SDLPSPQSNQ NGTTKNLSCR GVPLCQDNKV 600 LDLGLDTGHC KIFMQSEDVG RTLDLTAVGS YEELYCRLSD MFGMEKAELM SHVFYRDAAG 660 ALKHTGDEPF SHFRIG

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

MITFVDSAAG ERERGEGPRC LDPQLWHACA GGMVQMPPPG SRVYYFPQGH AEHAQGQAGA  60
VDFPPGARLQ ALVLCRVAAV RFMADPDTDE VFAKIRLVPA RPQDDADDAI AAAAAGQEDK  120
PASFAKTLTQ SDANNGGGFS VPRYCAETIF PRLDYSADPP VQTVLAKDVH GVVWKFRHIY  180
RGTPRRHLLT TGWSSFVNQK KLVAGDSIVF MRTENGDLCV GIRRAKKGGI GGPELLPPPP  240
PAATGNYGGF SMFLRGEEDG GNKMMGARGK VKVRVRPEEV AEAANLAASG QPFDVLYYPR  300
ASTPEFCVRA AAVRAAMRTQ WCPGMRFKMA FETEDSSRIS WFMGTVSAVQ VADPIRWPNS  360
PWRLLQVTWD EPDLLQNVKR VSPWLVELVS NMPAIHLAPF SPPRKKLCVP FYPDLPVDGQ  420
FPAPMFHGNP LGRGGVGPMC YFPDGTPAGI QGARHAQFGI SLSDLHLNKL QSSLSPHGLH  480
QVDHGGQPRI AAGLIIGHPA ARDDISCMLT IGNHQSNNKS DVKKASPQLM LFGKPILTEQ  540
QITLGNSGGF SPSAARKSSS EMSAEKSANN SDLPSPQSNQ NGTTKNLSCR GVPLCQDNKV  600
LDLGLDTGHC KIFMQSEDVG RTLDLTAVGS YEELYCRLSD MFGMEKAELM SHVFYRDAAG  660
ALKHTGDEPF SHFRIG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30080.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG055320.2