PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG052180.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 228aa MW: 25410.8 Da PI: 9.9242 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.5 | 2.6e-19 | 93 | 148 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rrk+ ++tkeq Le F+ ++ +s+ +++eLA++l+Lt rqV vWFqNrRa+ k TRIDC7BG052180.2 93 RRKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLTSRQVEVWFQNRRARTK 148 79999*************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 114.4 | 6.8e-37 | 94 | 182 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq +lLE sF++++ L++ +K+elar+L+l+ rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL++e eLr+ TRIDC7BG052180.2 94 RKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLTSRQVEVWFQNRRARTKLKQTEVDCEFLKRWCESLTHENQRLKHELLELRR 182 69*************************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MERQDLGAWL GLATGGGAAW HIHDGKRRTG PVQLDALFPQ HGKEERDQDE QKTGGKGARR 60 KIKVGGDDEG RSSSSNGPCL SDGGGSDDAG GGRRKKLRLT KEQCALLEGS FRAHNILSHV 120 QKQELARQLN LTSRQVEVWF QNRRARTKLK QTEVDCEFLK RWCESLTHEN QRLKHELLEL 180 RRSTAASVAA STKLFAQLPR AAAMVNLCPS CEKVSSYLFV CLFLRNNC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 92 | 99 | GRRKKLRL |
2 | 143 | 151 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 2e-41 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG052180.2 |