PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG052180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 224aa MW: 24773.9 Da PI: 10.172 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.6 | 2.6e-19 | 99 | 154 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rrk+ ++tkeq Le F+ ++ +s+ +++eLA++l+Lt rqV vWFqNrRa+ k TRIDC7BG052180.1 99 RRKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLTSRQVEVWFQNRRARTK 154 79999*************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 114.5 | 6.5e-37 | 100 | 188 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq +lLE sF++++ L++ +K+elar+L+l+ rqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l++en+rL++e eLr+ TRIDC7BG052180.1 100 RKKLRLTKEQCALLEGSFRAHNILSHVQKQELARQLNLTSRQVEVWFQNRRARTKLKQTEVDCEFLKRWCESLTHENQRLKHELLELRR 188 69*************************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
VREPGSMERQ DLGAWLGLAT GGGAAWHIHD GKRRTGPVQL DALFPQHGKE ERDQDEQKTG 60 GKGARRKIKV GGDDEGRSSS SNGPCLSDGG GSDDAGGGRR KKLRLTKEQC ALLEGSFRAH 120 NILSHVQKQE LARQLNLTSR QVEVWFQNRR ARTKLKQTEV DCEFLKRWCE SLTHENQRLK 180 HELLELRRST AASVAASTKL FAQLPRAAAM VNLCPSCEKV AVNN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 105 | GRRKKLRL |
2 | 149 | 157 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 2e-42 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG052180.1 |