PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG050440.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 354aa    MW: 38373.6 Da    PI: 9.4573
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG050440.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH34.82.9e-11526325
                      S---SGGGGTS--TTTTT-SS-S CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaH 25
                       elCr+++r G CkyG++C+F H
  TRIDC7BG050440.6  5 PELCRNYQR-GSCKYGAQCRFVH 26
                      69*******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
XXRRPELCRN YQRGSCKYGA QCRFVHANSN QQQQQQQAKP NPFGFGAGSR QQPQQPFGAQ  60
SQQFQQQQQK PNPFGFGVQG GAAQQRNEPG PAKPFQNKWV RDPSAPPTKQ AEAQPAPQAA  120
HTSCTDPESC RQQISDDFKN EAPLWKLTCY AHLRSGPCDI TGDISYEELR AKAYEEGKQG  180
KPMQSIVEGE RNLQNAKLTE FTNLLNKARA TPSFPTASSF PEVKNNSTFG SSQTNGPPVF  240
SSFNQLGAAT NFGSGPRTAA PGVPTNTIFG QPTQSTPSFG APTFGSTGMR FGVPVGSQTS  300
KQSFGSYQGS SMSSNSNFQN STSSGHHRDI DKQSVELLNG MTPRTSAMDQ APVE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.14e-51C3H family protein