PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG050440.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 388aa    MW: 42475.7 Da    PI: 8.8534
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG050440.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH34.63.2e-11324325
                      S---SGGGGTS--TTTTT-SS-S CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaH 25
                       elCr+++r G CkyG++C+F H
  TRIDC7BG050440.3  3 PELCRNYQR-GSCKYGAQCRFVH 24
                      69*******.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
RRPELCRNYQ RGSCKYGAQC RFVHANSNQQ QQQQQAKPNP FGFGAGSRQQ PQQPFGAQSQ  60
QFQQQQQKPN PFGFGVQGGA AQQRNEPGPA KPFQNKWVRD PSAPPTKQAE AQPAPQAAHT  120
SCTDPESCRQ QISDDFKNEA PLWKLTCYAH LRSGPCDITG DISYEELRAK AYEEGKQGKP  180
MQSIVEGERN LQNAKLTEFT NLLNKARATP SFPTASSFPE VKNNSTFGSS QTNGPPVFSS  240
FNQLGAATNF GSGPRTAAPG VPTNTIFGQP TQSTPSFGAP TFGSTGMRFG VPVGSQTSKQ  300
SFGSYQGSSM SSNSNFQNST SSGHHRDIDK QSVELLNGMT PRTSAMDQAP VEDSRNEKQD  360
DSIWLKEKWE IGQIPLDEPP QRHVSHVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.12e-50C3H family protein