PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG049140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SRS

Protein Properties

Length: 355aa MW: 35516.2 Da PI: 7.9993

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG049140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	210.3	4.9e-65	126	284	4	154
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa.......aeaaskrkrelkskkq.salss 88 ++sCqdCGn+akkdC+h+RCRtCC+srgf+C+thvkstWvpa+krrerqqqlaa+ + aaa++ a+ a+kr+rel + +++ TRIDC7BG049140.1 126 AGTSCQDCGNNAKKDCTHQRCRTCCRSRGFNCSTHVKSTWVPASKRRERQQQLAALFRGAAANNsaaataaAAVANKRPRELVRSLGrLPSAT 218 4579**************************************************9999888877777655666788888744433033444 PP DUF702 89 tklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 t ++ a++++ ++P+e+s eavfrcvr++ vd+ ++e+aYqt+vsigGh+fkGiL+d+G++e TRIDC7BG049140.1 219 TAMVDATTSSGEGDGRFPPELSLEAVFRCVRIGPVDEPDAEFAYQTSVSIGGHTFKGILRDHGPAE 284 5556666666777788*********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
LDGCWLLPWM AGFSLRGGGG GGGGGSGGRS GDRGDHPIGA DSLFLYARGA AAAAADTAGG 60 GGGGGGGIGF QLWHPHHQQA AAVPHTSQFF SSGVATGVVL GFSPHEGGGV GGVGLAGGGG 120 PGGGRAGTSC QDCGNNAKKD CTHQRCRTCC RSRGFNCSTH VKSTWVPASK RRERQQQLAA 180 LFRGAAANNS AAATAAAAVA NKRPRELVRS LGRLPSATTA MVDATTSSGE GDGRFPPELS 240 LEAVFRCVRI GPVDEPDAEF AYQTSVSIGG HTFKGILRDH GPAEEAAGQL PPSSGEYHEL 300 TGAAREGSSP AGSSEAAGGH GATVATSAAV LMDPYPTPIG AFAAGTQFFP HNPRT

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

LDGCWLLPWM AGFSLRGGGG GGGGGSGGRS GDRGDHPIGA DSLFLYARGA AAAAADTAGG  60
GGGGGGGIGF QLWHPHHQQA AAVPHTSQFF SSGVATGVVL GFSPHEGGGV GGVGLAGGGG  120
PGGGRAGTSC QDCGNNAKKD CTHQRCRTCC RSRGFNCSTH VKSTWVPASK RRERQQQLAA  180
LFRGAAANNS AAATAAAAVA NKRPRELVRS LGRLPSATTA MVDATTSSGE GDGRFPPELS  240
LEAVFRCVRI GPVDEPDAEF AYQTSVSIGG HTFKGILRDH GPAEEAAGQL PPSSGEYHEL  300
TGAAREGSSP AGSSEAAGGH GATVATSAAV LMDPYPTPIG AFAAGTQFFP HNPRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66350.1	4e-54	SRS family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG049140.1