PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG046180.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 162aa    MW: 18788.3 Da    PI: 9.0454
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG046180.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.87e-29555151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien +nrqvt+skRr gi+KKA EL vLCda+va+i+fsstgk +e++s
  TRIDC7BG046180.3  5 KRIENATNRQVTYSKRRSGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCS 55
                      79***********************************************96 PP
2K-box87.13.5e-2967153187
             K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 
                       yq++ g+sl+ +++e++q+ l+ Lk+ ++nL++e+R+++GedL+ L+++eL+ Leq+++ +lk++R++K++++++q+e+ +kk ++l
  TRIDC7BG046180.3  67 YQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDALEFEELRDLEQNVDAALKEVRQRKYHVITTQTETYKKKGEAL 153
                       67888999***************************************************************************8875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
KIEIKRIENA TNRQVTYSKR RSGIMKKARE LTVLCDAQVA IIMFSSTGKY HEFCSTGTDI  60
KGIFDRYQQA IGTSLWIEQY ENMQRTLSHL KDINRNLRTE IRQRMGEDLD ALEFEELRDL  120
EQNVDAALKE VRQRKYHVIT TQTETYKKKG EALPGGIQES AA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.16e-54MIKC_MADS family protein