PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG046180.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 229aa    MW: 26664.4 Da    PI: 10.4492
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG046180.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.91.3e-28959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      krien +nrqvt+skRr gi+KKA EL vLCda+va+i+fsstgk +e++s
  TRIDC7BG046180.1  9 KRIENATNRQVTYSKRRSGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCS 59
                      79***********************************************96 PP
2K-box78.12.2e-2671168198
             K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 
                       yq++ g+sl+ +++e++q+ l+ Lk+ ++nL++  R+++GedL+ L+++eL+ Leq+++ +lk++R++K++++++q+e+   + k  qe+ k+
  TRIDC7BG046180.1  71 YQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTHRRQRMGEDLDALEFEELRDLEQNVDAALKEVRQRKYHVITTQTETAHIQVKHSQEAYKN 163
                       67888999************************************************************************************* PP

             K-box  94 Lrkkl 98 
                       L+++l
  TRIDC7BG046180.1 164 LQQEL 168
                       **987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MGRGKIEIKR IENATNRQVT YSKRRSGIMK KARELTVLCD AQVAIIMFSS TGKYHEFCST  60
GTDIKGIFDR YQQAIGTSLW IEQYENMQRT LSHLKDINRN LRTHRRQRMG EDLDALEFEE  120
LRDLEQNVDA ALKEVRQRKY HVITTQTETA HIQVKHSQEA YKNLQQELVS MITVHACVFR  180
ACARTRRTDS WTTRPRAGGT AWRRWRWAAA RRRTCTPSAW CPASPTCTA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54340.15e-55MIKC_MADS family protein