PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG045080.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 455aa MW: 50600.3 Da PI: 4.5587

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG045080.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.7e-17	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT +Ed++l +v+ +G g+W+ + r g++R++k+c++rw ++l TRIDC7BG045080.1 34 KGPWTSDEDQRLRTYVEAHGEGNWNQVQRNAGLNRCGKSCRLRWANHL 81 79******************************************9986 PP
2	Myb_DNA-binding	48.1	2.7e-15	87	130	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++++eE+++++++++++G++ W++ a+ + gRt++++k++w++ TRIDC7BG045080.1 87 KGPFSKEEEQKIIELHALHGNK-WAKMASVLE-GRTDNEIKNFWNT 130 79******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
DEEIEADDSD GEEEEGGAPV GTGGAVASGP PMKKGPWTSD EDQRLRTYVE AHGEGNWNQV 60 QRNAGLNRCG KSCRLRWANH LRPNLKKGPF SKEEEQKIIE LHALHGNKWA KMASVLEGRT 120 DNEIKNFWNT RTKSLQKAGL GLYPDGLLSR LANQEMGSHS PDDSRGKKRP NELSQGNGLA 180 FDDIIFEKLD YKKQSDNFLT PNFTIQDSLP MNDINYPLKR HASSGIVSDY GGSPKCEQFS 240 NETEEASYND LNTEMSIVSF NNVISNSTPL LDGNFPISGN IPWPIKMELP SFQYAGYDTS 300 TSLCPASTLP EQVHGFGVPT KFEGEFDSEL PFSHVYPYIP HSSVFDDNTL EYSSFNELRT 360 YKSPTDSDAI FMDNKHNADI FQDKYFSSDP CATDVSAEAT FLNEDSTHSE YQPSNGPLNA 420 LFYGHFCDDV ALSARDDHQT VSSNGIHSTQ HLSGY

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

DEEIEADDSD GEEEEGGAPV GTGGAVASGP PMKKGPWTSD EDQRLRTYVE AHGEGNWNQV  60
QRNAGLNRCG KSCRLRWANH LRPNLKKGPF SKEEEQKIIE LHALHGNKWA KMASVLEGRT  120
DNEIKNFWNT RTKSLQKAGL GLYPDGLLSR LANQEMGSHS PDDSRGKKRP NELSQGNGLA  180
FDDIIFEKLD YKKQSDNFLT PNFTIQDSLP MNDINYPLKR HASSGIVSDY GGSPKCEQFS  240
NETEEASYND LNTEMSIVSF NNVISNSTPL LDGNFPISGN IPWPIKMELP SFQYAGYDTS  300
TSLCPASTLP EQVHGFGVPT KFEGEFDSEL PFSHVYPYIP HSSVFDDNTL EYSSFNELRT  360
YKSPTDSDAI FMDNKHNADI FQDKYFSSDP CATDVSAEAT FLNEDSTHSE YQPSNGPLNA  420
LFYGHFCDDV ALSARDDHQT VSSNGIHSTQ HLSGY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	3e-55	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG045080.1