PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG043820.11 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 200aa MW: 21916.5 Da PI: 11.2046 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56 | 1.3e-17 | 59 | 156 | 1 | 87 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk........lelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr 76 lp+G++F+Ptd+el+ e+L++kv++ + +i+ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r TRIDC7BG043820.11 59 LPAGVKFDPTDQELI-EHLEAKVQSGGtaavaapsH---PlidefipTIEGEdGICYTHPEKLP-GVSKDGLSRHFFHRPSKAYTTGTRKRR 145 799************.99******999665555551...055555444776646**********.556667799****************** PP NAM 77 atksgyWkatg 87 +++s+ +++g TRIDC7BG043820.11 146 KIHSSSNSSSG 156 97765544444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
TMVQRQRQEE EQAAAATTSS DRGLRSTAST CRTRAAVPGA ATRSTRSWYI RMIPDWVGLP 60 AGVKFDPTDQ ELIEHLEAKV QSGGTAAVAA PSHPLIDEFI PTIEGEDGIC YTHPEKLPGV 120 SKDGLSRHFF HRPSKAYTTG TRKRRKIHSS SNSSSGARRG GTRLARRGRW LWAADRGGAR 180 RFWCSTPTSA STESPRRPTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56620.1 | 2e-47 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG043820.11 |