PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG042040.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 666aa MW: 76406.3 Da PI: 8.0065

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG042040.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.2	1.1e-22	83	174	2	90
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn+YA +GF +r+++s+++ k ++ ++++fvC keg++++++ + ++k++r+r + r gC a+++v ++ +kw++tkl+leH+H ++ TRIDC7BG042040.6 83 FYNAYALGLGFGIRVARSRSErrKGSEVLVMKRFVCMKEGHHKKKDVEsSNKKKRKRLSIRDGCPAMMEVVRRGPEKWVITKLVLEHTHVIV 174 9***********99988883355567899******999887757889999*******************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MEFSSSEDHE LIEDFMDVED DTSTADVDQP TGVMASHIHC IDPSEGSMST AGNELLPAAD 60 ELGKNAEPYL GMEFVSDAAA RAFYNAYALG LGFGIRVARS RSERRKGSEV LVMKRFVCMK 120 EGHHKKKDVE SSNKKKRKRL SIRDGCPAMM EVVRRGPEKW VITKLVLEHT HVIVSPDKVR 180 EVQLLRLSGK EHADQLQEVR RNVFGDTGAS GLFTYLMRRQ SENSGFFYNV QVDSGNCLRN 240 AVWVDARSKM SYKYFGDAVY FDTTYTQNEN MLPFAAFTGM NHHGDCVVFG CALILDKTES 300 SYAWIFETWL TAMDKRLPFS FTTDEGKTMT ETVAKVFPQC FHRLCRWRVL SKCRKKLSDA 360 YMRFPELHNE LKRCVNECDT MPVFDMFWGS ILDKYGLREN TWLQSLFEAR HKWVPAYLTG 420 SFFAELSLTR RAETISRFYR NNFSTRAPLL SFITTFDQHI DRLYMNEAQK DLASFPPEQL 480 LKTNSILEKQ AASIYTRVAF EFFQTELIES LHHYAVKVQE SPYEAKYYVE RDGDPPTRHT 540 VVYNVAEKKA WCDCCRFAFS AILCRHVLGV FILADIDMIP EPCITKRWTK KAKTGPVFVG 600 RILVDEIRHA DSVTSRFSDL VRDAMRCGEK GALSEGSFKF AKEVLRKAYR EIDKLTKAGP 660 QQVGNR

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MEFSSSEDHE LIEDFMDVED DTSTADVDQP TGVMASHIHC IDPSEGSMST AGNELLPAAD  60
ELGKNAEPYL GMEFVSDAAA RAFYNAYALG LGFGIRVARS RSERRKGSEV LVMKRFVCMK  120
EGHHKKKDVE SSNKKKRKRL SIRDGCPAMM EVVRRGPEKW VITKLVLEHT HVIVSPDKVR  180
EVQLLRLSGK EHADQLQEVR RNVFGDTGAS GLFTYLMRRQ SENSGFFYNV QVDSGNCLRN  240
AVWVDARSKM SYKYFGDAVY FDTTYTQNEN MLPFAAFTGM NHHGDCVVFG CALILDKTES  300
SYAWIFETWL TAMDKRLPFS FTTDEGKTMT ETVAKVFPQC FHRLCRWRVL SKCRKKLSDA  360
YMRFPELHNE LKRCVNECDT MPVFDMFWGS ILDKYGLREN TWLQSLFEAR HKWVPAYLTG  420
SFFAELSLTR RAETISRFYR NNFSTRAPLL SFITTFDQHI DRLYMNEAQK DLASFPPEQL  480
LKTNSILEKQ AASIYTRVAF EFFQTELIES LHHYAVKVQE SPYEAKYYVE RDGDPPTRHT  540
VVYNVAEKKA WCDCCRFAFS AILCRHVLGV FILADIDMIP EPCITKRWTK KAKTGPVFVG  600
RILVDEIRHA DSVTSRFSDL VRDAMRCGEK GALSEGSFKF AKEVLRKAYR EIDKLTKAGP  660
QQVGNR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	125	139	KKKDVESSNKKKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-113	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG042040.6