PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG040850.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YC

Protein Properties

Length: 388aa MW: 42542.8 Da PI: 8.71

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG040850.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	86.3	3.2e-27	123	220	4	98
NF-YC 4 sfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 fw ++ +e + df+++ lP+ar+k++++a+ed mi+a++P+ l+k celf+ el++r+w a++ +rr + sdia+a++ t+ +dfl TRIDC7BG040850.1 123 GFWRERqeeMEATVDFNDRILPMARLKRLIRAEEDGMMIAADTPAYLAKLCELFVQELAVRAWACAQSHHRRIILESDIAEAIAFTESYDFLA 215 58976556699*********************************************************************************9 PP NF-YC 94 divpr 98 + + TRIDC7BG040850.1 216 TVLLE 220 87665 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
KILINTRAVC VLGSSARGDK SCFSKAMDRY VLLRLKQHGS SYWHGIPWVL YKGHPPRVHL 60 PTHRNPPLAS KSIHNIGTEL AVLPRVMGTE QGNEGTGAGE GRVEVRTGPR PALPAPQQRA 120 VDGFWRERQE EMEATVDFND RILPMARLKR LIRAEEDGMM IAADTPAYLA KLCELFVQEL 180 AVRAWACAQS HHRRIILESD IAEAIAFTES YDFLATVLLE HQREARLAGR AAIPTTVPVT 240 AARARLITRK RHMPDPNPPR PVHGVRRIRP RALPIPPPSD FRYVPVPFPF PSAPIGAAAM 300 AEGLMILPPI NHATTERVFF LDRNSGTDFA GENSAAETIA SPPPPAGPAG AVALPTVHPA 360 AYYLCAYPVT NDVEAFAVGN TDPDVDQH

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

KILINTRAVC VLGSSARGDK SCFSKAMDRY VLLRLKQHGS SYWHGIPWVL YKGHPPRVHL  60
PTHRNPPLAS KSIHNIGTEL AVLPRVMGTE QGNEGTGAGE GRVEVRTGPR PALPAPQQRA  120
VDGFWRERQE EMEATVDFND RILPMARLKR LIRAEEDGMM IAADTPAYLA KLCELFVQEL  180
AVRAWACAQS HHRRIILESD IAEAIAFTES YDFLATVLLE HQREARLAGR AAIPTTVPVT  240
AARARLITRK RHMPDPNPPR PVHGVRRIRP RALPIPPPSD FRYVPVPFPF PSAPIGAAAM  300
AEGLMILPPI NHATTERVFF LDRNSGTDFA GENSAAETIA SPPPPAGPAG AVALPTVHPA  360
AYYLCAYPVT NDVEAFAVGN TDPDVDQH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	2e-24	NF-YC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG040850.1