PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG039930.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 540aa MW: 59181.9 Da PI: 7.7698

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG039930.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.7	1.2e-15	219	298	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ evGF +r ks+++ +g+ +++ vC + gk+e+e+++ + r +C a+l++++++dg w+v++ + HnHe+ TRIDC7BG039930.3 219 EFYNLYSWEVGFGIRYGKSRQN-VSGTKCMQEIVCGCAGKPERENSS---------SMRSNCAAMLRLHRTDDGGWYVSENRASHNHEML 298 6***************9998.77778999*****9987666.........99***************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 540 aa Download sequence
MPNLGQTAEA GLDSGTISAA TVPQACEPPF VVGECGDATP DSAVVTPDPA VEAPLPYIQL 60 LDQVVGLVDV QSSGASCKSF SAGGGDLASA NPGCGTPAGV SHTSAESSRR SASSGSCTTF 120 SSGGVCLPSA RDANDTPAVV SSSAVQSLAQ NGAASGNSTI RVGWKRRPRG PRAPDERSVV 180 VDRVPPLEAA IRGFADRGTE VVVNPVLGTI FDSLAEAYEF YNLYSWEVGF GIRYGKSRQN 240 VSGTKCMQEI VCGCAGKPER ENSSSMRSNC AAMLRLHRTD DGGWYVSENR ASHNHEMLRT 300 CAEKLHWPSH RHIDTYTRDL VKQLRQNNVN LGKVYSIIGS LFGRMENVPF TKRCLRTFCG 360 KLSKEQADDD VRKTMDAFSE LGSNDPEFSY VVEVDKESKI KTLLWTNGRS KMQYHNFGDV 420 LTFDTTYKTN LYDMPFGIFV GVNNHFQSII MGGVMMREET IESFKWVFTE FIRLMGGKHP 480 KTILTDQARA MEVAIEQTMP DTTHRWCKWH VLRKAKEHLG PHYTKAVILG LRCTRWSMKC

Sequence ? help Back to Top

Protein Sequence Length: 540 aa Download sequence

MPNLGQTAEA GLDSGTISAA TVPQACEPPF VVGECGDATP DSAVVTPDPA VEAPLPYIQL  60
LDQVVGLVDV QSSGASCKSF SAGGGDLASA NPGCGTPAGV SHTSAESSRR SASSGSCTTF  120
SSGGVCLPSA RDANDTPAVV SSSAVQSLAQ NGAASGNSTI RVGWKRRPRG PRAPDERSVV  180
VDRVPPLEAA IRGFADRGTE VVVNPVLGTI FDSLAEAYEF YNLYSWEVGF GIRYGKSRQN  240
VSGTKCMQEI VCGCAGKPER ENSSSMRSNC AAMLRLHRTD DGGWYVSENR ASHNHEMLRT  300
CAEKLHWPSH RHIDTYTRDL VKQLRQNNVN LGKVYSIIGS LFGRMENVPF TKRCLRTFCG  360
KLSKEQADDD VRKTMDAFSE LGSNDPEFSY VVEVDKESKI KTLLWTNGRS KMQYHNFGDV  420
LTFDTTYKTN LYDMPFGIFV GVNNHFQSII MGGVMMREET IESFKWVFTE FIRLMGGKHP  480
KTILTDQARA MEVAIEQTMP DTTHRWCKWH VLRKAKEHLG PHYTKAVILG LRCTRWSMKC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-43	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG039930.3