PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG034280.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 769aa MW: 82998.2 Da PI: 6.3765 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.1 | 8.3e-20 | 107 | 162 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +++t++q++eLe++F+++++p+ ++r+eL+++l+L+ qVk+WFqN+R++ k TRIDC7BG034280.2 107 KKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRSLSLEPLQVKFWFQNKRTQIK 162 688999**********************************************9987 PP | |||||||
2 | START | 185.9 | 2.2e-58 | 286 | 509 | 1 | 206 |
HHHHHHHHHHHHHHHHC-TT-EEEE..EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEE CS START 1 elaeeaaqelvkkalaeepgWvkss..esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaet 81 ela +a++elv++a+++ep+Wv s e + ++e+ + f+++ ++ea+r++ vv+m+++ lve l+d++ qW+ + +a+t TRIDC7BG034280.2 286 ELAVAAMEELVRMAQLGEPLWVPSLdgEALGEEEYARAFPRGALgpkspeLRSEASRETDVVIMNHVSLVEMLMDVR-QWSALFSsivsRAAT 377 57899********************999999********99877*********************************.99999999999**** PP EEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS START 82 levissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167 l+v+s+g galqlm+ae+q++splvp Rd f+Ry++q+++g w++vdvS+d + +++ Sg+li++++ng+skvtwv TRIDC7BG034280.2 378 LDVLSTGvagnhdGALQLMSAEFQMPSPLVPtRDTQFLRYCKQHPGGAWAVVDVSLDDGLRSA-ARVGGHFRRRASGCLIQEMPNGYSKVTWV 469 **********************************************************99988.677777789******************** PP E-EE--S.SXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 168 ehvdlkg.rlphwllrslvksglaegaktwvatlqrqcek 206 ehv+ ++ +++h l+r+lv+sgla+ga++w++tl+rqce+ TRIDC7BG034280.2 470 EHVEAGDdAMVHDLYRPLVNSGLAFGARRWTSTLKRQCER 509 ****9752678***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 769 aa Download sequence |
VRFKSENLMD GMHHHQLPAM LQHQMVDHHL LLPQHHHHPH QQAATSESDA RGPHGGGNNN 60 SSNNNEELEM SKSGTGSDNN LDGEGGGGGG GENDEQEDPA GQHPRKKKRY HRHTQHQIQE 120 LEAFFKECPH PDDKQRKELS RSLSLEPLQV KFWFQNKRTQ IKTQHERQEN TALRTENEKL 180 RAENMRYKEA LANASCPNCG GPAAIGEMSF DEHHLRVENA RLRDEIDRIS AIAAKYVGGK 240 PGSGVAVASA SYPPLPPQSS GRSALDHLGM PGMFGGAEFD KPMVIELAVA AMEELVRMAQ 300 LGEPLWVPSL DGEALGEEEY ARAFPRGALG PKSPELRSEA SRETDVVIMN HVSLVEMLMD 360 VRQWSALFSS IVSRAATLDV LSTGVAGNHD GALQLMSAEF QMPSPLVPTR DTQFLRYCKQ 420 HPGGAWAVVD VSLDDGLRSA ARVGGHFRRR ASGCLIQEMP NGYSKVTWVE HVEAGDDAMV 480 HDLYRPLVNS GLAFGARRWT STLKRQCERL ASAMATVPSS GGDVITTAEG RRSMLKLAER 540 MTASFCGGVT ASTTHQWTTL SGSGAEDVRV MTRKSVDDPG RPPGIILNAA TSFWLPVPPS 600 RVFGFLRDDS TRSEWDILSN GGVVQEMAHI ANGSHHGNAV SLLRVNNANS NQSNMLILQE 660 CCTDATGSYV VYAPVDVVAM NVVLNGGDPD YVALLPSGFA ILPDGPAGAP DAGGSLLTVA 720 FQILVDSVPT AKLSLGSVAT VNSLIACTVD RIKAALVVSP GDNAGTAAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21750.2 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG034280.2 |