PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG030780.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 366aa MW: 41079.6 Da PI: 5.1971

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG030780.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.9	8.1e-53	9	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lp GfrFhPtdeelv +yLk k++g+ ++ evi+e+d++k+ePwdLp k +++e+ ew+fF+++d+ky++g+r+nrat++gyWkatgkd+ TRIDC7BG030780.5 9 LPLGFRFHPTDEELVRHYLKGKITGQIKNEVEVIPEIDVCKCEPWDLPdKaLIRSEDPEWFFFAPKDRKYPNGSRSNRATEAGYWKATGKDRV 101 699*********************988889***********96336677888******************************* PP NAM 92 vlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++sk k++ +g+kktLvf++grapkge+t W+mheyr TRIDC7BG030780.5 102 IKSKgekkKQHMIGMKKTLVFHRGRAPKGERTGWIMHEYRT 142 976555556**************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MTVMELKALP LGFRFHPTDE ELVRHYLKGK ITGQIKNEVE VIPEIDVCKC EPWDLPDKAL 60 IRSEDPEWFF FAPKDRKYPN GSRSNRATEA GYWKATGKDR VIKSKGEKKK QHMIGMKKTL 120 VFHRGRAPKG ERTGWIMHEY RTTEPEFESG EQGGYVLYRL FQKQLEKTER FILEEMDRSG 180 YSPTPSRSTP DNMEANEEAI TLINKESPES GLHGCPIELP GTIDTPGTPV TRWLADRNGN 240 SGIDEANVLG MPSHGNVDES PKADMSVGSL AHLIDSQTKN LGSHEFATVS APMLSHDDLD 300 KLLLQLPHNS VEDFLNETIA DPDEHSSTAC NVQYDADTGF MQVIIILASA VYVMIIVCLL 360 IFVCSL

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MTVMELKALP LGFRFHPTDE ELVRHYLKGK ITGQIKNEVE VIPEIDVCKC EPWDLPDKAL  60
IRSEDPEWFF FAPKDRKYPN GSRSNRATEA GYWKATGKDR VIKSKGEKKK QHMIGMKKTL  120
VFHRGRAPKG ERTGWIMHEY RTTEPEFESG EQGGYVLYRL FQKQLEKTER FILEEMDRSG  180
YSPTPSRSTP DNMEANEEAI TLINKESPES GLHGCPIELP GTIDTPGTPV TRWLADRNGN  240
SGIDEANVLG MPSHGNVDES PKADMSVGSL AHLIDSQTKN LGSHEFATVS APMLSHDDLD  300
KLLLQLPHNS VEDFLNETIA DPDEHSSTAC NVQYDADTGF MQVIIILASA VYVMIIVCLL  360
IFVCSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.2	7e-74	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG030780.5