PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG030710.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 311aa    MW: 32978 Da    PI: 8.2265
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG030710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.52.6e-07167208240
                       SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqc 40 
                       g WT +E ell +   +++ g   +W++Ia+ +g +Rt++++
  TRIDC7BG030710.1 167 GEWTDQEMELLRRQMLKHPAGepqRWEKIAAVFGGRRTPESV 208
                       78********************************99999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MEFIDDEWDS QPRARVVHSR ADAAANSSSP TANPASRSLP HVVACAAAAV LLLAAAYSLD  60
SAYQVFASIL VWIASSLLLA PFAPSSATGG DISVGRGSFL PDQEPSQEPT PDPIAPSRRG  120
RRQNAAPPPP KSSDPVAPPV QPPPRRQEAM GGGTAVLDGV EREEEVGEWT DQEMELLRRQ  180
MLKHPAGEPQ RWEKIAAVFG GRRTPESVIR AAKSGGAVAA GGSFEQFLRK RKPLDPRAGA  240
ADADTGGNAG GGDGGWSAGE DRSLLNALKE FPKDTAMRWE KVAAAVPGKT KSGCMKRVTE  300
LKRDFRSSKE P
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1228233LRKRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45420.13e-39MYB_related family protein