PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG030370.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 268aa    MW: 29957.3 Da    PI: 5.9987
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG030370.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.91.2e-13257555
               AP2  5 GVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55
                      GV++ k++g+++A+++d  s+  g  ++ k+++lg++ t+e Aa+a++ a++k++g
  TRIDC7BG030370.7  2 GVTRLKWSGKYEAHLWDnTSQvEGrkRKgKHVYLGSYVTEENAARAHDLAALKYRG 57
                      9****************666696675336*************************98 PP
2AP247.25.5e-15102155155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s y+GV+++k +g+W A+I    e +    k ++lg+f t+ eAa+a++ a+ +l+g
  TRIDC7BG030370.7 102 SSYRGVTRRK-DGKWQARIGRIGEsR--DtKDIYLGTFETEVEAAEAYDLAAIQLRG 155
                       67*****999.9******99953323..36**********99************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
HGVTRLKWSG KYEAHLWDNT SQVEGRKRKG KHVYLGSYVT EENAARAHDL AALKYRGITQ  60
PTKLNFNISD YAKEIEIMKS MNQDEFVAYI RRQSSCFSRG TSSYRGVTRR KDGKWQARIG  120
RIGESRDTKD IYLGTFETEV EAAEAYDLAA IQLRGVHAVT NFDISNYSEE GLKKLEGSSE  180
VVNLEDQSEV TKLAVTNLDI SKHCEDGLKK LDGASQVVNL ESQSEVTKLS VTNFDISNCC  240
EDGLKKLEGS SEVANLEDQS EVTKLAGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.15e-69AP2 family protein