PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG030370.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 253aa MW: 27908.1 Da PI: 4.7698 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 21.9 | 4.3e-07 | 11 | 42 | 26 | 55 |
AP2 26 g.kr.krfslgkfgtaeeAakaaiaarkkleg 55 g ++ +++lg++ t+e Aa+a++ a++k++g TRIDC7BG030370.5 11 GcHCgSSVYLGSYVTEENAARAHDLAALKYRG 42 444569************************98 PP | |||||||
2 | AP2 | 47.3 | 5e-15 | 87 | 140 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++k +g+W A+I e + k ++lg+f t+ eAa+a++ a+ +l+g TRIDC7BG030370.5 87 SSYRGVTRRK-DGKWQARIGRIGEsR--DtKDIYLGTFETEVEAAEAYDLAAIQLRG 140 67*****999.9******99953323..36**********99************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MFCMGSVSTF GCHCGSSVYL GSYVTEENAA RAHDLAALKY RGITQPTKLN FNISDYAKEI 60 EIMKSMNQDE FVAYIRRQSS CFSRGTSSYR GVTRRKDGKW QARIGRIGES RDTKDIYLGT 120 FETEVEAAEA YDLAAIQLRG VHAVTNFDIS NYSEEGLKKL EGSSEVVNLE DQSEVTKLAV 180 TNLDISKHCE DGLKKLDGAS QVVNLESQSE VTKLSVTNFD ISNCCEDGLK KLEGSSEVAN 240 LEDQSEVTKL AGQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 5e-53 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG030370.5 |