PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG030370.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 355aa MW: 38786.5 Da PI: 5.9606

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG030370.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.2	5.7e-15	83	142	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++ k++g+++A+++d s+ g ++ k+++lg++ t+e Aa+a++ a++k++g TRIDC7BG030370.2 83 SCYHGVTRLKWSGKYEAHLWDnTSQvEGrkRKgKHVYLGSYVTEENAARAHDLAALKYRG 142 79*****************666696675336***********************98 PP
2	AP2	46.6	8.6e-15	187	240	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++k +g+W A+I e + k ++lg+f t+ eAa+a++ a+ +l+g TRIDC7BG030370.2 187 SSYRGVTRRK-DGKWQARIGRIGEsR--DtKDIYLGTFETEVEAAEAYDLAAIQLRG 240 67***999.9**99953323..36******99**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MATTVQPHSP DPTAITTTPA PPPPPSPPRQ ENPTAAGEGV EIAALDEQPA AVAVAVADKG 60 KTAPGGGKLV AEAMRKCAAP RSSCYHGVTR LKWSGKYEAH LWDNTSQVEG RKRKGKHVYL 120 GSYVTEENAA RAHDLAALKY RGITQPTKLN FNISDYAKEI EIMKSMNQDE FVAYIRRQSS 180 CFSRGTSSYR GVTRRKDGKW QARIGRIGES RDTKDIYLGT FETEVEAAEA YDLAAIQLRG 240 VHAVTNFDIS NYSEEGLKKL EGSSEVVNLE DQSEVTKLAV TNLDISKHCE DGLKKLDGAS 300 QVVNLESQSE VTKLSVTNFD ISNCCEDGLK KLEGSSEVAN LEDQSEVTKL FILLF

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MATTVQPHSP DPTAITTTPA PPPPPSPPRQ ENPTAAGEGV EIAALDEQPA AVAVAVADKG  60
KTAPGGGKLV AEAMRKCAAP RSSCYHGVTR LKWSGKYEAH LWDNTSQVEG RKRKGKHVYL  120
GSYVTEENAA RAHDLAALKY RGITQPTKLN FNISDYAKEI EIMKSMNQDE FVAYIRRQSS  180
CFSRGTSSYR GVTRRKDGKW QARIGRIGES RDTKDIYLGT FETEVEAAEA YDLAAIQLRG  240
VHAVTNFDIS NYSEEGLKKL EGSSEVVNLE DQSEVTKLAV TNLDISKHCE DGLKKLDGAS  300
QVVNLESQSE VTKLSVTNFD ISNCCEDGLK KLEGSSEVAN LEDQSEVTKL FILLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	1e-69	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG030370.2