PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG030370.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 350aa MW: 38033.4 Da PI: 5.9607

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG030370.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.7	1e-11	83	139	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++ k++g+++A+++d s+ g krk + g++ t+e Aa+a++ a++k++g TRIDC7BG030370.1 83 SCYHGVTRLKWSGKYEAHLWDnTSQvEGrKRKGKH-GSYVTEENAARAHDLAALKYRG 139 79*****************55558777778888.999999************98 PP
2	AP2	46.6	8.4e-15	184	237	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++k +g+W A+I e + k ++lg+f t+ eAa+a++ a+ +l+g TRIDC7BG030370.1 184 SSYRGVTRRK-DGKWQARIGRIGEsR--DtKDIYLGTFETEVEAAEAYDLAAIQLRG 237 67***999.9**99953323..36******99**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MATTVQPHSP DPTAITTTPA PPPPPSPPRQ ENPTAAGEGV EIAALDEQPA AVAVAVADKG 60 KTAPGGGKLV AEAMRKCAAP RSSCYHGVTR LKWSGKYEAH LWDNTSQVEG RKRKGKHGSY 120 VTEENAARAH DLAALKYRGI TQPTKLNFNI SDYAKEIEIM KSMNQDEFVA YIRRQSSCFS 180 RGTSSYRGVT RRKDGKWQAR IGRIGESRDT KDIYLGTFET EVEAAEAYDL AAIQLRGVHA 240 VTNFDISNYS EEGLKKLEGS SEVVNLEDQS EVTKLAVTNL DISKHCEDGL KKLDGASQVV 300 NLESQSEVTK LSVTNFDISN CCEDGLKKLE GSSEVANLED QSEVTKLAGQ

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MATTVQPHSP DPTAITTTPA PPPPPSPPRQ ENPTAAGEGV EIAALDEQPA AVAVAVADKG  60
KTAPGGGKLV AEAMRKCAAP RSSCYHGVTR LKWSGKYEAH LWDNTSQVEG RKRKGKHGSY  120
VTEENAARAH DLAALKYRGI TQPTKLNFNI SDYAKEIEIM KSMNQDEFVA YIRRQSSCFS  180
RGTSSYRGVT RRKDGKWQAR IGRIGESRDT KDIYLGTFET EVEAAEAYDL AAIQLRGVHA  240
VTNFDISNYS EEGLKKLEGS SEVVNLEDQS EVTKLAVTNL DISKHCEDGL KKLDGASQVV  300
NLESQSEVTK LSVTNFDISN CCEDGLKKLE GSSEVANLED QSEVTKLAGQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72570.1	4e-65	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG030370.1