PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG026740.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SRS | ||||||||
Protein Properties | Length: 196aa MW: 20516.4 Da PI: 9.4974 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 118.8 | 7.3e-37 | 98 | 180 | 3 | 93 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklss 93 +gt+sCqdCGnqakkdC h+RCRtCCksrgfdCathvkstWvpaa+rrer++q+ + ++ +++ kr+re + s+++ t++ss TRIDC7BG026740.3 98 AGTISCQDCGNQAKKDCPHMRCRTCCKSRGFDCATHVKSTWVPAARRRERHHQQPQGQA------SAEPFKRPREG--GQPSSATPTTTSS 180 789***********************************************777666543......34455555554..2333333333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MAGFPLGGGG HHSRGGRDDD GSHPPGINPS SSSSAAAFLY ATTPSRGGFQ LWQGQPQPQH 60 EQQQHPFYGG ASSSIIRFAD DPAASGSSSR CGGRGSGAGT ISCQDCGNQA KKDCPHMRCR 120 TCCKSRGFDC ATHVKSTWVP AARRRERHHQ QPQGQASAEP FKRPREGGQP SSATPTTTSS 180 GTLSYSLVST GSISSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19790.1 | 4e-28 | SRS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG026740.3 |