PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG025080.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 156aa MW: 18065.1 Da PI: 10.6603 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.7 | 5.6e-32 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s TRIDC7BG025080.3 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 17.7 | 1.5e-07 | 83 | 112 | 7 | 36 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqR 36 ++ e+++ +++++e+ kLk++++nLqr+qR TRIDC7BG025080.3 83 QNRENEQLKNSRNEYLKLKARVDNLQRTQR 112 45788999********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIVFSN RGKLYEFCST 60 QSMTKTLDKY QKCSYAGPET TVQNRENEQL KNSRNEYLKL KARVDNLQRT QRLSIKLQFN 120 ILSKWNTIET LRSTTSVSKT SYILKGGICL VKILIH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 1e-58 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG025080.3 |