PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG025080.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 175aa MW: 20526.6 Da PI: 10.2824 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.4 | 7.1e-32 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s TRIDC7BG025080.2 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 99 | 6.9e-33 | 83 | 174 | 7 | 98 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ e+++ +++++e+ kLk++++nLqr+qR+llGedL+sL +keL++Le+qL++slk+iR+++++++++q+ elq++e++ +e+nk+Lr k+ TRIDC7BG025080.2 83 QNRENEQLKNSRNEYLKLKARVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHMVDQLTELQRREQMFSEANKCLRIKV 174 45788999********************************************************************************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIVFSN RGKLYEFCST 60 QSMTKTLDKY QKCSYAGPET TVQNRENEQL KNSRNEYLKL KARVDNLQRT QRNLLGEDLD 120 SLGIKELESL EKQLDSSLKH IRTTRTQHMV DQLTELQRRE QMFSEANKCL RIKVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 1e-88 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG025080.2 |