PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG025060.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 271aa MW: 29686 Da PI: 6.7849

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG025060.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	48.9	1.8e-15	12	43	47	78
SSEEETTT--SS--S-STTTT-------S--- CS SBP 47 srfhelsefDeekrsCrrrLakhnerrrkkqa 78 rfh l+efDe+krsCr+rL++hn+rrrk+q+ TRIDC7BG025060.3 12 QRFHLLTEFDEAKRSCRKRLDGHNRRRRKPQP 43 49***************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
RPRDALLPTV QQRFHLLTEF DEAKRSCRKR LDGHNRRRRK PQPDVMNSAS FMTSQQGTRF 60 SPFPTPRPEQ NWPGIIKTEE NPYYAHQLPL GISNRQHFGG SASTYAKEGR RFPFLQEGEI 120 NFATGVALEP SVCQPLLKTV APPESSSSSS KMFSDGLTPV LDSDCALSLL SAPANSSGID 180 VGPMVQQTEH IPIAQPLFSN LQFSSSSWFS RTQASTGTVS ATGFSCPVGE NEQLNNVLSS 240 DNNDLNYNGI FHVGSEGSSD GAPPSLPFPW Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	41	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	2e-15	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG025060.3