PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG025060.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 53aa    MW: 6066.94 Da    PI: 8.7234
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG025060.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP74.81.4e-23753248
                      -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
               SBP  2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48
                      C v+gC+adls++++yhrrhkvCe+hsk+pvv+v+g+e rfCqqCsr
  TRIDC7BG025060.2  7 CAVDGCRADLSKCRDYHRRHKVCEAHSKTPVVTVAGREMRFCQQCSR 53
                      **********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 53 aa     Download sequence    
QQQCPSCAVD GCRADLSKCR DYHRRHKVCE AHSKTPVVTV AGREMRFCQQ CSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.12e-22SBP family protein