PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG022920.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 372aa MW: 38991.9 Da PI: 9.1106

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG022920.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	119.8	1.3e-37	71	153	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS.......EEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr.......fhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC +dls ak+yh+rhkvC++h+k p v+v+gleqrfCqqCsr fh+l efD++krsCrrrLa+hnerrrk+ TRIDC7BG022920.2 71 RCQVEGCGVDLSGAKQYHSRHKVCSMHTKEPRVVVAGLEQRFCQQCSRfpsdhirFHQLPEFDQGKRSCRRRLAGHNERRRKA 153 6********************************************633333337***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
GGCDGSGGDG SGGGGGDDQQ RHGLKFGKKI YFEDATGTGG VNASSSKPPA GGGRKGKAVA 60 AGGASGSAPP RCQVEGCGVD LSGAKQYHSR HKVCSMHTKE PRVVVAGLEQ RFCQQCSRFP 120 SDHIRFHQLP EFDQGKRSCR RRLAGHNERR RKAPPGPLAS RYGRLAASFE EPGRFRSYLL 180 DFSYPRVPSS VRDAWPGARP GYRMPGEIQW QGNLDLRPHT GAATGYHGHH AYSSHGGGFP 240 GPELPPGGCL AGVAADSSCA LSLLSTQPWD NTPHGASHDH RSAGFDGHPA GVSPSIMASN 300 YMPPPASPWG GSRGHEGGRN APHQQLPHDV ALHEVHHPAG SSQHGHFSGE LELALQGNRT 360 APGPRGGGDH SS

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

GGCDGSGGDG SGGGGGDDQQ RHGLKFGKKI YFEDATGTGG VNASSSKPPA GGGRKGKAVA  60
AGGASGSAPP RCQVEGCGVD LSGAKQYHSR HKVCSMHTKE PRVVVAGLEQ RFCQQCSRFP  120
SDHIRFHQLP EFDQGKRSCR RRLAGHNERR RKAPPGPLAS RYGRLAASFE EPGRFRSYLL  180
DFSYPRVPSS VRDAWPGARP GYRMPGEIQW QGNLDLRPHT GAATGYHGHH AYSSHGGGFP  240
GPELPPGGCL AGVAADSSCA LSLLSTQPWD NTPHGASHDH RSAGFDGHPA GVSPSIMASN  300
YMPPPASPWG GSRGHEGGRN APHQQLPHDV ALHEVHHPAG SSQHGHFSGE LELALQGNRT  360
APGPRGGGDH SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	1e-41	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG022920.2