PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG022920.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 386aa MW: 40214.1 Da PI: 8.7958

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG022920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	136.2	1e-42	76	151	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +CqvegC +dls ak+yh+rhkvC++h+k p v+v+gleqrfCqqCsrfh+l efD++krsCrrrLa+hnerrrk+ TRIDC7BG022920.1 76 RCQVEGCGVDLSGAKQYHSRHKVCSMHTKEPRVVVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKA 151 6*************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
MEIGSGGCDG SGGDGSGGGG GDDQQRHGLK FGKKIYFEDA TGTGGVNASS SKPPAGGGRK 60 GKAVAAGGAS GSAPPRCQVE GCGVDLSGAK QYHSRHKVCS MHTKEPRVVV AGLEQRFCQQ 120 CSRFHQLPEF DQGKRSCRRR LAGHNERRRK APPGPLASRY GRLAASFEEP GRFRSYLLDF 180 SYPRVPSSVR DAWPGARPGY RMPGEIQWQG NLDLRPHTGA ATGYHGHHAY SSHGGGFPGP 240 ELPPGGCLAG VAADSSCALS LLSTQPWDNT PHGASHDHRS AGFDGHPAGV SPSIMASNYM 300 PPPASPWGGS RGHEGGRNAP HQQLPHDVAL HEVHHPAGSS QHGHFSGELE LALQGNRTAP 360 GPRGGGDHSS GGGAFDHPGS SSNWSL

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

MEIGSGGCDG SGGDGSGGGG GDDQQRHGLK FGKKIYFEDA TGTGGVNASS SKPPAGGGRK  60
GKAVAAGGAS GSAPPRCQVE GCGVDLSGAK QYHSRHKVCS MHTKEPRVVV AGLEQRFCQQ  120
CSRFHQLPEF DQGKRSCRRR LAGHNERRRK APPGPLASRY GRLAASFEEP GRFRSYLLDF  180
SYPRVPSSVR DAWPGARPGY RMPGEIQWQG NLDLRPHTGA ATGYHGHHAY SSHGGGFPGP  240
ELPPGGCLAG VAADSSCALS LLSTQPWDNT PHGASHDHRS AGFDGHPAGV SPSIMASNYM  300
PPPASPWGGS RGHEGGRNAP HQQLPHDVAL HEVHHPAGSS QHGHFSGELE LALQGNRTAP  360
GPRGGGDHSS GGGAFDHPGS SSNWSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	5e-44	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG022920.1