PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG022390.5
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SBP
Protein Properties Length: 1107aa    MW: 120915 Da    PI: 7.2534
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG022390.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP1308.9e-41192269178
                       --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
               SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                       +Cqv++C+adl++ak+yhrrhkvCe+hsk+++++v +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+
  TRIDC7BG022390.5 192 MCQVDDCRADLTSAKDYHRRHKVCEIHSKTTKAVVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 269
                       6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1107 aa     Download sequence    
MQREVGPQVA SPLYLHQIQP LPPHAAAAAR KRGSPWPAVE PPENAAMGAG AAAGGNWNPS  60
MWDWDSRAFT ARPSSDALRL GGGLNHHHHH HHQQQAQPPP ATAAEVQRQG GGGAGDLSLQ  120
LTLREEASMA MDVSPTTTLS SSPSPPARAS QEQAVRPSKR VRSGSPGTAS GGGGGGGGGG  180
GGSASGGGSY PMCQVDDCRA DLTSAKDYHR RHKVCEIHSK TTKAVVGNQM QRFCQQCSRF  240
HPLSEFDEGK RSCRRRLAGH NRRRRKTQPT DVASQLLLPE NQENAANRTQ DIVNLITVIA  300
RLQGGNVGKL PSIPPIPDKD NLVQIISKIN SINNANSLAK SPPSEAIDLN ASQGQQQDSS  360
VQNATKVIDK QTAPSTMDLL TVLSGALGTS TPETNTSQSQ GSSDSSGNNK SKSHSTEPAC  420
VVNSHEKSIR PFPAAGMIRS SSTHGSPPEV YKQPDRDTHP YLSLQLFGNN EDIPVKMDTA  480
NKYLSSESSN PMDERSPSSS PPVTHTFFPT RSVNEGIRHP RIADYGEDGA TVENSTTRAW  540
CAPPLELFKD SERPTENGSP PNPTYQSCYA STSGSDHSTS TSNSDGQDRT GKIIFKLFGK  600
EPGSIPGNLR DEVVNWLKHS PTEMEGYIRP GCLVLSMYLS MPTIAWDELE ENFLQRVNSL  660
VQASDLDFWR KGRTWNTPEL TLVTPIAVVG GRKTSLVLKG RNLTIPGTQI HCTSAGKYIS  720
KEVLCSAYPG TIYDDSGVET FDLPGEPSLT LGRCFIEVEN RFRGNSFPVI FANKSICQEL  780
RNLEDELEDS RFPDVSPDDQ VHDARRLKPR DQVLHFLNEL GWLFQKAAAC TPSTKSDVSD  840
SELIQFSTAR FRHLLLFSNE RDWCSLTKTL LEILSKRSMV SEELSHETLE MLSEIHLLNR  900
AVKRKSSHMV HLLVHFVVIC PDNSKLYPFL PNYPGPGGLT PLHLAASIDD AEDIVDALTD  960
DPQQIGLSCW HSVLDDEGLS PELYAKFRNN GSYNELVTRK LVDRKNSQVT IVLNKGEIHM  1020
DQPGNVGVNN ASGIQALEVR SCNQCAILES GLLRRPMRSR GLLARPYIHS MLAIAAVCVC  1080
VCVFMRALLR FNSGRSFKWE RLDFGPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G20980.10.0SBP family protein