PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG022390.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 1075aa MW: 118108 Da PI: 7.3939

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG022390.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130	8.5e-41	136	213	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqv++C+adl++ak+yhrrhkvCe+hsk+++++v +++qrfCqqCsrfh lsefDe+krsCrrrLa+hn+rrrk+q+ TRIDC7BG022390.1 136 MCQVDDCRADLTSAKDYHRRHKVCEIHSKTTKAVVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQP 213 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1075 aa Download sequence
WNPSMWDWDS RAFTARPSSD ALRLGGGLNH HHHHHHQQQA QPPPATAAEV QRQGGGGAGD 60 LSLQLTLREE ASMAMDVSPT TTLSSSPSPP ARASQEQAVR PSKRVRSGSP GTASGGGGGG 120 GGGGGGSASG GGSYPMCQVD DCRADLTSAK DYHRRHKVCE IHSKTTKAVV GNQMQRFCQQ 180 CSRFHPLSEF DEGKRSCRRR LAGHNRRRRK TQPTDVASQL LLPENQENAA NRTQDIVNLI 240 TVIARLQGGN VGKLPSIPPI PDKDNLVQII SKINSINNAN SLAKSPPSEA IDLNASQGQQ 300 QDSSVQNATK VIDKQTAPST MDLLTVLSGA LGTSTPETNT SQSQGSSDSS GNNKSKSHST 360 EPACVVNSHE KSIRPFPAAG MIRSSSTHGS PPEVYKQPDR DTHPYLSLQL FGNNEDIPVK 420 MDTANKYLSS ESSNPMDERS PSSSPPVTHT FFPTRSVNEG IRHPRIADYG EDGATVENST 480 TRAWCAPPLE LFKDSERPTE NGSPPNPTYQ SCYASTSGSD HSTSTSNSDG QDRTGKIIFK 540 LFGKEPGSIP GNLRDEVVNW LKHSPTEMEG YIRPGCLVLS MYLSMPTIAW DELEENFLQR 600 VNSLVQASDL DFWRKGRFLV RSDNQLVSYK DGMTRLSKSW RTWNTPELTL VTPIAVVGGR 660 KTSLVLKGRN LTIPGTQIHC TSAGKYISKE VLCSAYPGTI YDDSGVETFD LPGEPSLTLG 720 RCFIEVENRF RGNSFPVIFA NKSICQELRN LEDELEDSRF PDVSPDDQVH DARRLKPRDQ 780 VLHFLNELGW LFQKAAACTP STKSDVSDSE LIQFSTARFR HLLLFSNERD WCSLTKTLLE 840 ILSKRSMVSE ELSHETLEML SEIHLLNRAV KRKSSHMVHL LVHFVVICPD NSKLYPFLPN 900 YPGPGGLTPL HLAASIDDAE DIVDALTDDP QQIGLSCWHS VLDDEGLSPE LYAKFRNNGS 960 YNELVTRKLV DRKNSQVTIV LNKGEIHMDQ PGNVGVNNAS GIQALEVRSC NQCAILESGL 1020 LRRPMRSRGL LARPYIHSML AIAAVCVCVC VFMRALLRFN SGRSFKWERL DFGPT

Sequence ? help Back to Top

Protein Sequence Length: 1075 aa Download sequence

WNPSMWDWDS RAFTARPSSD ALRLGGGLNH HHHHHHQQQA QPPPATAAEV QRQGGGGAGD  60
LSLQLTLREE ASMAMDVSPT TTLSSSPSPP ARASQEQAVR PSKRVRSGSP GTASGGGGGG  120
GGGGGGSASG GGSYPMCQVD DCRADLTSAK DYHRRHKVCE IHSKTTKAVV GNQMQRFCQQ  180
CSRFHPLSEF DEGKRSCRRR LAGHNRRRRK TQPTDVASQL LLPENQENAA NRTQDIVNLI  240
TVIARLQGGN VGKLPSIPPI PDKDNLVQII SKINSINNAN SLAKSPPSEA IDLNASQGQQ  300
QDSSVQNATK VIDKQTAPST MDLLTVLSGA LGTSTPETNT SQSQGSSDSS GNNKSKSHST  360
EPACVVNSHE KSIRPFPAAG MIRSSSTHGS PPEVYKQPDR DTHPYLSLQL FGNNEDIPVK  420
MDTANKYLSS ESSNPMDERS PSSSPPVTHT FFPTRSVNEG IRHPRIADYG EDGATVENST  480
TRAWCAPPLE LFKDSERPTE NGSPPNPTYQ SCYASTSGSD HSTSTSNSDG QDRTGKIIFK  540
LFGKEPGSIP GNLRDEVVNW LKHSPTEMEG YIRPGCLVLS MYLSMPTIAW DELEENFLQR  600
VNSLVQASDL DFWRKGRFLV RSDNQLVSYK DGMTRLSKSW RTWNTPELTL VTPIAVVGGR  660
KTSLVLKGRN LTIPGTQIHC TSAGKYISKE VLCSAYPGTI YDDSGVETFD LPGEPSLTLG  720
RCFIEVENRF RGNSFPVIFA NKSICQELRN LEDELEDSRF PDVSPDDQVH DARRLKPRDQ  780
VLHFLNELGW LFQKAAACTP STKSDVSDSE LIQFSTARFR HLLLFSNERD WCSLTKTLLE  840
ILSKRSMVSE ELSHETLEML SEIHLLNRAV KRKSSHMVHL LVHFVVICPD NSKLYPFLPN  900
YPGPGGLTPL HLAASIDDAE DIVDALTDDP QQIGLSCWHS VLDDEGLSPE LYAKFRNNGS  960
YNELVTRKLV DRKNSQVTIV LNKGEIHMDQ PGNVGVNNAS GIQALEVRSC NQCAILESGL  1020
LRRPMRSRGL LARPYIHSML AIAAVCVCVC VFMRALLRFN SGRSFKWERL DFGPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20980.1	0.0	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG022390.1