PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG021410.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 179aa    MW: 19576.2 Da    PI: 5.5625
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG021410.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC169.93e-53421451101
             NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 
                       ql++fw++q   ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fd
  TRIDC7BG021410.2  42 QLQVFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFD 134
                       89******99999******************************************************************************** PP

             NF-YC  91 flvdivprdel 101
                       flvdivprde 
  TRIDC7BG021410.2 135 FLVDIVPRDEA 145
                       *********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
AAVYPAAAPP GYPHAPALYA PQPPPAAVAA ASQQTAAQQQ QQLQVFWAEQ YREIEATTDF  60
KNHNLPLARI KKIMKADEDV RMIAAEAPVV FARACEMFIL ELTHRGWAHA EENKRRTLQK  120
SDIAAAIART EVFDFLVDIV PRDEAKDAEA AVAAGMPHPA AGMPAADMGY YYVPQHDSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115121RRTLQKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.33e-57NF-YC family protein