PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG020680.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 356aa MW: 39154.8 Da PI: 7.6342

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG020680.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25	3.3e-08	10	72	6	56
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC..........TS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl..........gLterqVkvWFqNrRakek 56 +ft+ ++ e+ee+ + n p+++ ++ LA+k ++ +qV +WFqNrR+ ++ TRIDC7BG020680.3 10 RFTHAEVAEMEEHLRHlnNAIPQRNVIQGLAEKFtasaaragkiPVQYKQVWNWFQNRRYSQR 72 69999*****999554999*****************99999***********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
PPSSGGPAFR FTHAEVAEME EHLRHLNNAI PQRNVIQGLA EKFTASAARA GKIPVQYKQV 60 WNWFQNRRYS QRARTPRGAP PPQGKMLPTG ADEHHPASFR AQGSSSSYPG SHSGKSASDG 120 GQAEFEAKSA RDGAWYDVAA FLSHRLFETG DPEVKVRFSG FGPEEDEWIN VRKCVRLRSL 180 PCEAAECVAV LPGDLILCFQ EGKEQALYFD ARVLDAQRRR HDVRGCRCRF LVRYDHDHSE 240 EIVPLRKVCR RPETDFRLQI LHASRAAASA DAQNVSPVEQ KPQKAHKMMD VNTAEVTVVR 300 NPDQGGPSDK PAAPLPAAPA GTHGDSVSDV QMGSVEVIPK VEAANEAHDD KMNVGA

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

PPSSGGPAFR FTHAEVAEME EHLRHLNNAI PQRNVIQGLA EKFTASAARA GKIPVQYKQV  60
WNWFQNRRYS QRARTPRGAP PPQGKMLPTG ADEHHPASFR AQGSSSSYPG SHSGKSASDG  120
GQAEFEAKSA RDGAWYDVAA FLSHRLFETG DPEVKVRFSG FGPEEDEWIN VRKCVRLRSL  180
PCEAAECVAV LPGDLILCFQ EGKEQALYFD ARVLDAQRRR HDVRGCRCRF LVRYDHDHSE  240
EIVPLRKVCR RPETDFRLQI LHASRAAASA DAQNVSPVEQ KPQKAHKMMD VNTAEVTVVR  300
NPDQGGPSDK PAAPLPAAPA GTHGDSVSDV QMGSVEVIPK VEAANEAHDD KMNVGA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18380.1	1e-100	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG020680.3