PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG019790.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 334aa    MW: 37596.9 Da    PI: 8.1812
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG019790.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH222.9e-07116138326
                       S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   3 telCrffartGtCkyGdrCkFaHg 26 
                       +++C+ fa++G C+yG+ C+ +Hg
  TRIDC7BG019790.5 116 MPICS-FAAGGNCPYGEECPHMHG 138
                       68999.**************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MFARFTREAH ALMVTVADMT MSRRNSPLRP PPSSSTATHV ASTSPQLLSS GRPLHLGHQT  60
NSSNQRQQIS MDKLAVSESK PAWRNEVQLN SVSEDGIGWS SIQTAQNQTS MKLADMPICS  120
FAAGGNCPYG EECPHMHGDL CAFCGKMCLH PYRPDERQEH IKLCEKNHKR LEALKRSQEI  180
ECSVCLDRVL SKSTAAERKF GLLSECDHPF CISCIRNWRG NSPTSGMDVN SALRACPICR  240
KLSYYVIPSV LWYFSKEEKL EITENYKAKL KSIDCKYFDF GTGTCPFGTS CFYKHAYRDG  300
RLEEVVLRHL DCDDGSTLIA KNIRLSDFLG RLHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.11e-122C3H family protein