PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG018420.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CO-like
Protein Properties Length: 395aa    MW: 43483.2 Da    PI: 4.6906
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG018420.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box18.54.1e-06445540
          zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
                       C+ ++e++   +C+++   lC +C  + H+       Ht++
  TRIDC7BG018420.4  4 LCDYCGEHRSMVYCRSDAASLCLSCDRNVHSAnalsrrHTRT 45
                      6******99*********************657888889876 PP
2zf-B_box25.92.1e-084789541
          zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                       C+++ ++++   C + ++ lC++C  ++H+       H++++
  TRIDC7BG018420.4 47 LCDRCASQPAMVRCLEENTSLCQNCDWNGHSAgssaagHKRQN 89
                      7*****************************6688899998876 PP
3CCT62.61.2e-21339382144
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                       R+ a++RYkeK+k+RkF+ kirYesRKa+A+ R+RvKGrFvk+ 
  TRIDC7BG018420.4 339 RDSAITRYKEKKKRRKFDHKIRYESRKARADVRKRVKGRFVKAG 382
                       899**************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
MGALCDYCGE HRSMVYCRSD AASLCLSCDR NVHSANALSR RHTRTLLCDR CASQPAMVRC  60
LEENTSLCQN CDWNGHSAGS SAAGHKRQNI NCYSGCPSSA ELSRMWSFIL DIPNVAPELN  120
CEQVISMMSI SDSAVSNGDN AQGDNSLVDM ACATLDEEDK QKSVIGSSSE AALNLLPPAN  180
NQTAVSVDST TAKYTPDKHM FSKDSIYEDF SMDDIDLSYE NYEELFGNSH IQTEELFDDA  240
GIDSYFEVKE ATAVNSDEPK PKQPAASNAL SADSGMSNPA VKEDDSSLCI PVRQAISYSG  300
FTGESIPEEY QDCGVSPMLL MGEPPWLPPG PDGSFAGIRD SAITRYKEKK KRRKFDHKIR  360
YESRKARADV RKRVKGRFVK AGEAYDYDPL DTRSY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1349353KKKRR
2349354KKKRRK
3349375KKKRRKFDHKIRYESRKARADVRKRVK
4350376KKKRRKFDHKIRYESRKARADVRKRVK
5350354KKRRK
6351377KKKRRKFDHKIRYESRKARADVRKRVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07650.24e-96CO-like family protein