PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG017930.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 307aa MW: 32486.5 Da PI: 5.1727

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG017930.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	150.4	3.6e-47	49	143	1	95
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 vreqdr++Pianv+rim+++lPa+akis+dake +qecvsefisfvt+ea+++c+ ++rkt+n++d++wal lGf+dyv pl+v+l++ r+ TRIDC7BG017930.1 49 VREQDRLMPIANVIRIMRRALPAHAKISDDAKEAIQECVSEFISFVTGEANERCRMQHRKTVNAEDIVWALNRLGFDDYVVPLSVFLHRMRDP 141 69*****************************************************************************************97 PP NF-YB 94 eg 95 e+ TRIDC7BG017930.1 142 EA 143 75 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
ALTNSISKAL KPSASATTCI APWLALDMEN DGVPNGPAAP APTQGTPVVR EQDRLMPIAN 60 VIRIMRRALP AHAKISDDAK EAIQECVSEF ISFVTGEANE RCRMQHRKTV NAEDIVWALN 120 RLGFDDYVVP LSVFLHRMRD PEAGTGGAAA GDSRAVTSAP PRAAPPVIHA VPLQAQRPMY 180 APPAPLQVEN QMQRPVYAPP APVQVQMQRG IYGPRAPVHG YAVGMAPVRA NVGGQYQVFG 240 GERVMAQQYY GYGYEEGAYG AGSSNGGAAI GDEESSSNGV PAPGEGMGEP EPEPAAEESH 300 DKPVQSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	6e-52	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG017930.1