PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG017260.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 375aa MW: 40668.2 Da PI: 6.7893

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG017260.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.5	5.7e-09	312	360	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq TRIDC7BG017260.1 312 NSHSLAERVRREKISERMKFLQDLVPGC----SKVIGKAVMLDEIINYVQSLQ 360 58***********************9....566***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
PPPSPFHLAA SLPPPPARRF GHCPLRFRSW RTRSDRSEME TNEKNAADLE EKNQPSGHSQ 60 QPSFHGPGFS LSPEAQMDSS SSALAAMGNP FPPGLWNPPG QNFGLGETNT NAMLNGHQFS 120 SFLGMLSAAT PAYPGAQSGF MDCGTGFPGL SANSLGAMMD HPFSRNPPMG SFQNDIETSR 180 EMNVDEGCKD ALLTGDRQQG DTESSHGVDA SSKELSKPEC SGGAGQDEGP SVSCPKKRKR 240 PSQDRGVKNV QEGSQQLATL AAKQEKDDDD KDEPKRPIGT SRKSNGKQTE DKSDAPKEDY 300 IHIRARSGQA TNSHSLAERV RREKISERMK FLQDLVPGCS KVIGKAVMLD EIINYVQSLQ 360 RQVEFLSMKL SAVNP

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

PPPSPFHLAA SLPPPPARRF GHCPLRFRSW RTRSDRSEME TNEKNAADLE EKNQPSGHSQ  60
QPSFHGPGFS LSPEAQMDSS SSALAAMGNP FPPGLWNPPG QNFGLGETNT NAMLNGHQFS  120
SFLGMLSAAT PAYPGAQSGF MDCGTGFPGL SANSLGAMMD HPFSRNPPMG SFQNDIETSR  180
EMNVDEGCKD ALLTGDRQQG DTESSHGVDA SSKELSKPEC SGGAGQDEGP SVSCPKKRKR  240
PSQDRGVKNV QEGSQQLATL AAKQEKDDDD KDEPKRPIGT SRKSNGKQTE DKSDAPKEDY  300
IHIRARSGQA TNSHSLAERV RREKISERMK FLQDLVPGCS KVIGKAVMLD EIINYVQSLQ  360
RQVEFLSMKL SAVNP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	235	241	PKKRKRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	5e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG017260.1