PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG017190.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CO-like

Protein Properties

Length: 383aa MW: 42102.9 Da PI: 6.6392

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG017190.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.3	2.3e-06	22	65	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 r C+ + + +C+ ++ +lC++C ++H H++v TRIDC7BG017190.2 22 RLCDGCCAVPSVVYCRADSAYLCASCDAQIHAAnrvasrHERVL 65 67999999999********************6567888888775 PP
2	CCT	64.7	2.8e-22	314	357	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRYkeK+k+RkFeK++rY++RKa+Ae RpR+KGrF+k++ TRIDC7BG017190.2 314 REARVLRYKEKKKSRKFEKTTRYATRKAYAEARPRIKGRFAKRS 357 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MNCVSNGTVY EEAVGREGSW ARLCDGCCAV PSVVYCRADS AYLCASCDAQ IHAANRVASR 60 HERVLLSEAY KHAPVVLECH ADAAALCAAY EAQVHYTNLL AAMHQRVPVV SHPAAAIPAA 120 SLFAEAAATP PVLGRKEEDA SWLLLSKDSD NHNHSGNNSS SSSTSRYFGE VDQYFDLVGY 180 NSYYDSRMSN QEQYVMQEQQ HLQQMQKEYA EQQMQKEYVE KEGSECIVPS QSAIVSRPHQ 240 SGYAPLVGAE QAASVTAGVS AYTDSLNNSI SFSMEAGIVP DNTVQSSILR PAGAIGLFSS 300 PSLQTPLHLS SKEREARVLR YKEKKKSRKF EKTTRYATRK AYAEARPRIK GRFAKRSDAE 360 MEVDQTFSTA ALSDSSYSTV PWF

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MNCVSNGTVY EEAVGREGSW ARLCDGCCAV PSVVYCRADS AYLCASCDAQ IHAANRVASR  60
HERVLLSEAY KHAPVVLECH ADAAALCAAY EAQVHYTNLL AAMHQRVPVV SHPAAAIPAA  120
SLFAEAAATP PVLGRKEEDA SWLLLSKDSD NHNHSGNNSS SSSTSRYFGE VDQYFDLVGY  180
NSYYDSRMSN QEQYVMQEQQ HLQQMQKEYA EQQMQKEYVE KEGSECIVPS QSAIVSRPHQ  240
SGYAPLVGAE QAASVTAGVS AYTDSLNNSI SFSMEAGIVP DNTVQSSILR PAGAIGLFSS  300
PSLQTPLHLS SKEREARVLR YKEKKKSRKF EKTTRYATRK AYAEARPRIK GRFAKRSDAE  360
MEVDQTFSTA ALSDSSYSTV PWF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15850.1	3e-49	CO-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG017190.2