PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG016820.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 428aa MW: 47977.1 Da PI: 4.5597

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG016820.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	104.3	1.5e-32	56	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.....sg 81 lp+G++F+P+d+el+ + L+k+ ++ + + ++ ++e+ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+++ + TRIDC7BG016820.4 56 LPKGVKFDPSDQELLGHLLAKHDKAGSqphpfIAEFIPtVEEAdGICYTHPQKLP-GVKQDGSVSHFFHRTFKAYNTGTRKRRKINtsdlaDV 147 799**********999987655444456542222223666655******.677888899**************7544455588 PP NAM 82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+k+v+ +g++ g+kk++v+y + + k++kt+Wv+h+y+l TRIDC7BG016820.4 148 RWHKTGKTKPVMI-DGQHLGCKKIMVLYmsTVKGGKPKKTNWVIHQYHL 195 9********.999*******6644666777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
RTSWLIDSQR IASKIKNVSG SRDLSKQKWL SNPTKECPNC SHVIDNSDVV HQWPGLPKGV 60 KFDPSDQELL GHLLAKHDKA GSQPHPFIAE FIPTVEEADG ICYTHPQKLP GVKQDGSVSH 120 FFHRTFKAYN TGTRKRRKIN TSDLADVRWH KTGKTKPVMI DGQHLGCKKI MVLYMSTVKG 180 GKPKKTNWVI HQYHLGTGED EQNEEYVVSK LFFQQQNGEK SALELTNTDV METTVAVADL 240 TDLPEPTAEE DDERISSISN QEVLLNNEYN ADEEALHSHE HNTYQENGDC EINMEEKAAD 300 ENAIYPSSEK PEDGDNPPSQ DPNLWEGDSQ FLLDSQQLAE NLAICDEFLQ SQTSCGDGDE 360 PGLIKPRLAV YAQLPVEDLK KDLQECKDLG PSDNAILEPE NNAELRLSQL EFSQDSYTMG 420 IFTGQVAD

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

RTSWLIDSQR IASKIKNVSG SRDLSKQKWL SNPTKECPNC SHVIDNSDVV HQWPGLPKGV  60
KFDPSDQELL GHLLAKHDKA GSQPHPFIAE FIPTVEEADG ICYTHPQKLP GVKQDGSVSH  120
FFHRTFKAYN TGTRKRRKIN TSDLADVRWH KTGKTKPVMI DGQHLGCKKI MVLYMSTVKG  180
GKPKKTNWVI HQYHLGTGED EQNEEYVVSK LFFQQQNGEK SALELTNTDV METTVAVADL  240
TDLPEPTAEE DDERISSISN QEVLLNNEYN ADEEALHSHE HNTYQENGDC EINMEEKAAD  300
ENAIYPSSEK PEDGDNPPSQ DPNLWEGDSQ FLLDSQQLAE NLAICDEFLQ SQTSCGDGDE  360
PGLIKPRLAV YAQLPVEDLK KDLQECKDLG PSDNAILEPE NNAELRLSQL EFSQDSYTMG  420
IFTGQVAD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-126	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG016820.4