PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG016800.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 845aa MW: 93311.2 Da PI: 8.1252

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG016800.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	118.1	4.6e-37	117	192	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv+gC+adl + ++yhrrhkvCe h+k++ v ++++e+rfCqqCsrfh ++efDe+k+sCr+rLa+hn+rrrk+ TRIDC7BG016800.3 117 CQVDGCHADLGDDRDYHRRHKVCEPHTKSTLVRIKNIEHRFCQQCSRFHLVQEFDEGKKSCRSRLATHNRRRRKAP 192 *************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 845 aa Download sequence
MSGGLKNKKK KGHEWDLNDW RWDGNLFLAT PSPNADAPSG CGSRELGLAE EGGSFGAAAA 60 DKRRRRKRVT TVDNPEECSN TAILHHERIA VRRGQMGEEE GPASATAGAS SSSAPSCQVD 120 GCHADLGDDR DYHRRHKVCE PHTKSTLVRI KNIEHRFCQQ CSRFHLVQEF DEGKKSCRSR 180 LATHNRRRRK APAEAVNSLG ENQSLTNTLL LLLRQLAGQD SAASSSEQIN GPNLLVSLLK 240 NLAAVAGTQA CQDMLKDATS SNAGNYVGNQ SGPPVHAEEP PVKRRAQNFD LNDAYVEEDE 300 SRTDKIVFKL FGKQPNDFPA DLRAQILNWL SHYPSDMESY IRPGCVILTI YLRLPNWMWD 360 KLNVDPAPWI ENLISISTNG FWETGWLYAR VQDRLTLSCN GRLMLVSPWQ PVIGDKHQIL 420 CVTPIAAAYN STAKFSVRGF NIVQPTTKLL CIFDGKYLVQ EATQKLHDDT RIQQGPKCLT 480 FSCSFPSTSG RGFIEVEDYD QSSICFPFVV AKECICCEIR MLEEKLNIIA FGDALEGRED 540 LMASRSQALK FLHEIGWLLQ RSDTRATSSK APQQHHAVGF SAARFRWLLS FAVDQEWCGV 600 VKMLLDTLFQ GNIDVASPVE FVLGESLVFA AVNKRSKPLV ACLLRYTTKS APVGGGAVAT 660 PAQFLFTPDM IGPSDITPLH VAATITNAAA VLDALTDDPQ QLGIKTWKNA RDATGYTPED 720 CARRRGQTSY IQMVQNKINS RLPAAHVSVP MTTTGTAAEA GRPRSTDQTV FEFEKSPPGC 780 RQCVQLQHIA YRPCPNRFLS NRPVVLSLVA IAAVCVCVGL IMQSPPVVRG VPGPFLWNHI 840 RWGPT

Sequence ? help Back to Top

Protein Sequence Length: 845 aa Download sequence

MSGGLKNKKK KGHEWDLNDW RWDGNLFLAT PSPNADAPSG CGSRELGLAE EGGSFGAAAA  60
DKRRRRKRVT TVDNPEECSN TAILHHERIA VRRGQMGEEE GPASATAGAS SSSAPSCQVD  120
GCHADLGDDR DYHRRHKVCE PHTKSTLVRI KNIEHRFCQQ CSRFHLVQEF DEGKKSCRSR  180
LATHNRRRRK APAEAVNSLG ENQSLTNTLL LLLRQLAGQD SAASSSEQIN GPNLLVSLLK  240
NLAAVAGTQA CQDMLKDATS SNAGNYVGNQ SGPPVHAEEP PVKRRAQNFD LNDAYVEEDE  300
SRTDKIVFKL FGKQPNDFPA DLRAQILNWL SHYPSDMESY IRPGCVILTI YLRLPNWMWD  360
KLNVDPAPWI ENLISISTNG FWETGWLYAR VQDRLTLSCN GRLMLVSPWQ PVIGDKHQIL  420
CVTPIAAAYN STAKFSVRGF NIVQPTTKLL CIFDGKYLVQ EATQKLHDDT RIQQGPKCLT  480
FSCSFPSTSG RGFIEVEDYD QSSICFPFVV AKECICCEIR MLEEKLNIIA FGDALEGRED  540
LMASRSQALK FLHEIGWLLQ RSDTRATSSK APQQHHAVGF SAARFRWLLS FAVDQEWCGV  600
VKMLLDTLFQ GNIDVASPVE FVLGESLVFA AVNKRSKPLV ACLLRYTTKS APVGGGAVAT  660
PAQFLFTPDM IGPSDITPLH VAATITNAAA VLDALTDDPQ QLGIKTWKNA RDATGYTPED  720
CARRRGQTSY IQMVQNKINS RLPAAHVSVP MTTTGTAAEA GRPRSTDQTV FEFEKSPPGC  780
RQCVQLQHIA YRPCPNRFLS NRPVVLSLVA IAAVCVCVGL IMQSPPVVRG VPGPFLWNHI  840
RWGPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	67	KRRRRK
2	62	68	KRRRRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	1e-169	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG016800.3