PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG015280.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 360aa MW: 40489.5 Da PI: 6.035

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG015280.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	54	2.8e-17	2	55	13	71
E2F_TDP 13 flkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 f++l+ + + ++v l+++a++L v +rRRiYDi+NVLe+++++ +++kn+++w+g TRIDC7BG015280.5 2 FVALYDRDDVETVGLDDAARRL---GV--ERRRIYDIVNVLESVGILVRRAKNRYTWIG 55 9999999889**********.....****************************98 PP
2	E2F_TDP	79.1	4.1e-25	135	215	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ + e ++v+l+e+a+ L+ e ++++k+RR+YDi+NVL++lnliek ++k+++rw g TRIDC7BG015280.5 135 RKEKSLGLLTQNFVKLFLTMEVETVSLDEAARLLLGErhaesNMRTKVRRLYDIANVLSSLNLIEKtqqvdSRKPAFRWLG 215 79**************************************************************9999999****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
SFVALYDRDD VETVGLDDAA RRLGVERRRI YDIVNVLESV GILVRRAKNR YTWIGFEGVP 60 AALKELKERT LREMSGLAPP PEESSAANVS DDEDDDDKLG DADGDADSEK LSQSLDNASD 120 KPDVPMCPPR SVDHRKEKSL GLLTQNFVKL FLTMEVETVS LDEAARLLLG ERHAESNMRT 180 KVRRLYDIAN VLSSLNLIEK TQQVDSRKPA FRWLGQAKRK EGATVTVALP PSRKIMSSKR 240 AFGTDITNID NKRGKLVLET ENKPKLMQGG SSMLKTFESQ LGQGKSSGFV YGPFHPAGAR 300 KHEVDDQTVR ENEMKNIQDW ESLAVSFRPQ YQNHALSDLF GHYVEAWKSW YLDLTRDSTS

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

SFVALYDRDD VETVGLDDAA RRLGVERRRI YDIVNVLESV GILVRRAKNR YTWIGFEGVP  60
AALKELKERT LREMSGLAPP PEESSAANVS DDEDDDDKLG DADGDADSEK LSQSLDNASD  120
KPDVPMCPPR SVDHRKEKSL GLLTQNFVKL FLTMEVETVS LDEAARLLLG ERHAESNMRT  180
KVRRLYDIAN VLSSLNLIEK TQQVDSRKPA FRWLGQAKRK EGATVTVALP PSRKIMSSKR  240
AFGTDITNID NKRGKLVLET ENKPKLMQGG SSMLKTFESQ LGQGKSSGFV YGPFHPAGAR  300
KHEVDDQTVR ENEMKNIQDW ESLAVSFRPQ YQNHALSDLF GHYVEAWKSW YLDLTRDSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	2e-93	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG015280.5