PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7BG015280.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 437aa    MW: 48244.5 Da    PI: 7.6839
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7BG015280.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP65.66.5e-2167133171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealn..liekkekneirwkg 71 
                       rk+ksL+ll+++f++l+ + + ++v l+++a++L    v  +rRRiYDi+NVLe+++  l+ + +kn+++w+g
  TRIDC7BG015280.1  67 RKQKSLGLLCSNFVALYDRDDVETVGLDDAARRL---GV--ERRRIYDIVNVLESVGvsLVRR-AKNRYTWIG 133
                       79****************9999************...**..*************986225666.*******98 PP
2E2F_TDP78.65.7e-25212292171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                       rkeksL+lltq+f+kl+ + e ++v+l+e+a+ L+ e     ++++k+RR+YDi+NVL++lnliek     ++k+++rw g
  TRIDC7BG015280.1 212 RKEKSLGLLTQNFVKLFLTMEVETVSLDEAARLLLGErhaesNMRTKVRRLYDIANVLSSLNLIEKtqqvdSRKPAFRWLG 292
                       79****************************************************************9999999******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    
KIPPSLPFPP RHPPEMDPAA AAGAPAAAAQ PPPPPPPPYL PPRLVIDGAG GGSGAAARAC  60
RHHAYSRKQK SLGLLCSNFV ALYDRDDVET VGLDDAARRL GVERRRIYDI VNVLESVGVS  120
LVRRAKNRYT WIGFEGVPAA LKELKERTLR EMSGLAPPPE ESSAANVSDD EDDDDKLGDA  180
DGDADSEKLS QSLDNASDKP DVPMCPPRSD HRKEKSLGLL TQNFVKLFLT MEVETVSLDE  240
AARLLLGERH AESNMRTKVR RLYDIANVLS SLNLIEKTQQ VDSRKPAFRW LGQAKRKEGA  300
TVTVALPPSR KIMSSKRAFG TDITNIDNKR GKLVLETENK PKLMQGGSSM LKTFESQLGQ  360
GKSSGFVYGP FHPAGARKHE VDDQTVRENE MKNIQDWESL AVSFRPQYQN HALSDLFGHY  420
VEAWKSWYLD LTRDSTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-103E2F/DP family protein