PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG012750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 324aa MW: 36033.6 Da PI: 6.646 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.7 | 1.1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTteEde+l +++++G g+W++ ++ g++R++k+c++rw +yl TRIDC7BG012750.1 14 KGPWTTEEDEKLMIYIQKHGHGSWRALPQLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 59 | 1.1e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ ++++++ lG++ W++Ia++++ gRt++++k++w+++l TRIDC7BG012750.1 67 RGKFSQEEEQTILQLHTILGNK-WSAIAKHLP-GRTDNEIKNFWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MGRPPSSDEN GLKKGPWTTE EDEKLMIYIQ KHGHGSWRAL PQLAGLNRCG KSCRLRWTNY 60 LKPDIKRGKF SQEEEQTILQ LHTILGNKWS AIAKHLPGRT DNEIKNFWNT HLRKKLIKMG 120 IDPMTHRPRT DFFAALPQLI ALANLRQFIN QQPWDDHTAR LQAQTAQAAN LQYVQSLLHS 180 AASIAASPTT SSSLNSLTMD LEQINFLNPP QMLSPSALEG ISGIDLAGHV SQSQMPSVTF 240 DHTIGNINPG SHNNVESSEQ HCDEGENSSK KRLFLSENSL PPLTDMAASN ICNTISTSNC 300 DGVSSPFPSW SEILLDEELL SEFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 4e-91 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG012750.1 |