PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG010500.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 254aa MW: 27063.5 Da PI: 8.6989 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.8 | 3.9e-16 | 16 | 61 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT Ede+l+ +vk +G g+W+ +++ g++R++k+c++rw++yl TRIDC7BG010500.1 16 AWTSKEDEILASYVKAHGEGRWRELPQRAGLRRCGKSCRLRWLNYL 61 6*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.8 | 6.8e-15 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+v+++ +lG++ W+ Ia +++ gRt++++k++w++ TRIDC7BG010500.1 67 RGNISDDEEELIVRLHGLLGNR-WSIIAGRLP-GRTDNEIKNYWNST 111 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
SGTRCVPNRL VIAIFAWTSK EDEILASYVK AHGEGRWREL PQRAGLRRCG KSCRLRWLNY 60 LRPNIKRGNI SDDEEELIVR LHGLLGNRWS IIAGRLPGRT DNEIKNYWNS TLGRKALPAR 120 PAIAAARTIA TPVASGSSSS TAGNAAVALS TSVPAVLHAA APSSPTAAVW APKPVRCTGG 180 LFFRRETPPP APVVAETRAG GEEGDACSGS CSETSSAEPC SSGSGGGDWM DDVRALASFL 240 ESDEEWLKSL HMAG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 2e-52 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG010500.1 |