PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG010470.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 316aa MW: 34886.7 Da PI: 8.4766

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG010470.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76	3.8e-24	92	136	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++ +k+C+rH+hrg++rsrk++e+ TRIDC7BG010470.1 92 DPEPGRCRRTDGKKWRCSREAYGESKYCDRHMHRGKNRSRKPVEP 136 79****************************************985 PP
2	QLQ	55.7	1.5e-19	16	50	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FTa+Q+ +L++Q+l+yKy+aa+ +vP+eL+++++ TRIDC7BG010470.1 16 LFTASQWRELEHQALIYKYMAAGSQVPHELVLPLR 50 5********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MMLGGHGGGG GGGRCLFTAS QWRELEHQAL IYKYMAAGSQ VPHELVLPLR HRDAAFAAID 60 TAPSLACYPP PQPSLGWGLY GAGSQYARKP EDPEPGRCRR TDGKKWRCSR EAYGESKYCD 120 RHMHRGKNRS RKPVEPMSSA SSVSSPAASY RHTALSMSPP TPADTPSYGH GHGHDHLRAA 180 AGQSQINPLQ LHLDTPSPPP SYHRYAPAQQ YGGSFFPSRQ QVQEEEARRR QHFLALGADL 240 SLDKPDATTA ASSTTEEKPL RRFFDEWPRD GNAVEGRPWN MGHRDETLLS MSIPTTTASH 300 PDLAAASRYH HHHNDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-40	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG010470.1