PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG009190.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ERF

Protein Properties

Length: 380aa MW: 41954.7 Da PI: 4.6787

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG009190.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.8	5.4e-18	136	186	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++G+r+++ +g+W+AeIrdp++ r++lg++ +aeeAa+a++ +++++g TRIDC7BG009190.1 136 SQFRGIRRRP-WGKWAAEIRDPRK---GVRVWLGTYNSAEEAARAYDVEARRIRG 186 789*****.******954...4**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
HHTPHQPTRL LSFALLYPRS HVLPAMCGGA ILSDIIPPPR RATGGNVWRA DKKRRARPDA 60 AAGRPRRVPE EEFQEEEGDA EFEADFEGFV EAEEESDGEA KPFPVRRTGF SGDGLKATAA 120 GDDDCASGSA KRKRKSQFRG IRRRPWGKWA AEIRDPRKGV RVWLGTYNSA EEAARAYDVE 180 ARRIRGKKAK VNFPEEAPMA PQQRCATSVK VPEFNTEQKP VLNTMGNADV YSCPAVDYTL 240 NQQFVQPQNM SFVPTVNAVE APFMNFSSDQ GSNSFSCSDF SWENDIKTPD ITSVLASIPT 300 STEVNESAFL QNNGINSTVP PVMGDANVDL ADLEPYMKFL MDDGSDESID SILSCDVPQD 360 VVGNMGLWTF DDMPLSAGFY

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

HHTPHQPTRL LSFALLYPRS HVLPAMCGGA ILSDIIPPPR RATGGNVWRA DKKRRARPDA  60
AAGRPRRVPE EEFQEEEGDA EFEADFEGFV EAEEESDGEA KPFPVRRTGF SGDGLKATAA  120
GDDDCASGSA KRKRKSQFRG IRRRPWGKWA AEIRDPRKGV RVWLGTYNSA EEAARAYDVE  180
ARRIRGKKAK VNFPEEAPMA PQQRCATSVK VPEFNTEQKP VLNTMGNADV YSCPAVDYTL  240
NQQFVQPQNM SFVPTVNAVE APFMNFSSDQ GSNSFSCSDF SWENDIKTPD ITSVLASIPT  300
STEVNESAFL QNNGINSTVP PVMGDANVDL ADLEPYMKFL MDDGSDESID SILSCDVPQD  360
VVGNMGLWTF DDMPLSAGFY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	131	145	KRKRKSQFRGIRRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14230.3	3e-36	ERF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG009190.1