PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG007260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 657aa MW: 71522 Da PI: 6.1029 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.1 | 1.9e-28 | 216 | 269 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl TRIDC7BG007260.1 216 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 269 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 38.8 | 2.2e-12 | 218 | 268 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I + m+ +++t++++ s++qky+ TRIDC7BG007260.1 218 RVVWSVELHRKFVAAVNQLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 268 678********************************99*************7 PP | |||||||
3 | Response_reg | 78.3 | 2.6e-26 | 30 | 138 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ +++l+++l++ +y +v+++ ++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++ +ge + +l+ + TRIDC7BG007260.1 30 VLAVDDDPVCLKVLEVLLRRCQY-HVTTTNQAATALRLLRENKdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKSVLKGIT 120 799********************.***************99999********************87754.558******************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ +eel++ TRIDC7BG007260.1 121 HGACDYLLKPVRIEELRN 138 ****************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 657 aa Download sequence |
MLLDAMTMEA RKGLMERERE RDQFPVGMRV LAVDDDPVCL KVLEVLLRRC QYHVTTTNQA 60 ATALRLLREN KDMFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSVNG ETKSVLKGIT 120 HGACDYLLKP VRIEELRNVW QHVVRRKFSN REPNNNHDLC KEISKPPSAD SYHRLGQATC 180 GMSSDQSNRA GKKRKEPHSE EEDEGEDNDD AAGSKKPRVV WSVELHRKFV AAVNQLGIDK 240 AVPKRILELM NVEKLTRENV ASHLQKYRLY LRRLSAVASQ QASIAAAFGG RDPFLHMGAF 300 EGLHSYHQPF APPAALPSLN PHGLLSGAGA AAFGLQDLAS PKANQCSSSN GAVSHCAGDT 360 EKFHIVSLQD NQQADLSQGL TSSLGQPQLH QKWIHQETSD LCSVFSGGAL ANTMSGTLQR 420 VTSSSLPPED LLECTAHIKV GAHPSIGIPT GSSGLLERSV GVSADLRDSC ISQQCALPIS 480 DGFSVDKLPL HIPFDGTGTT KLDASFVAGE QEMDQKGIFS ERMAVTVCPS ESLIVASNAK 540 CGASSCGSTM LLPPHDTEKH SKYLQFVVAS NSRHRMDGGM RQDQRLNSGG FSYDGGAIVP 600 EQTDMYDLGV PKLQGGFNSS SCNFDGLLNS MIKVESDEVP FTENDLGCEL FPLGACI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-106 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG007260.1 |