PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG007010.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 417aa MW: 45067.8 Da PI: 6.2617

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG007010.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.5	3.1e-13	368	415	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 rW+ E+e l ++v+q+G+g+Wk I ++ + gRt ++k++w++ TRIDC7BG007010.2 368 RWSSVEEETLRNGVEQFGSGNWKDILSHNPdvfIGRTQVDLKDKWRNM 415 9*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MPRLTPADAS LILDHVVGDA SIPTAAANVL LAGLPFPDRP TPRLLRSLLL RRLDTDPVSA 60 AALDSLQLLA SLPDSGPASP VSAAHLAVAA FLACSAPDFD AAARALFGRP GGRARRAVDE 120 EEGGDTALAS SEALAAADQF EAAVGNAFSQ DVLKGLFGDR AKAERRVRDL LAAEWAAIGP 180 SRLELAAEQI VGDGAVETWR AADETVRAKY RILAGEEKAR EILSRIEDRI STPQVHKVIH 240 DLKSRCADLH NVVDDPLPAA KAAADKVLAA RMDKAVHIND EELNNQAANC SVAGPSAVND 300 QGETLRKGTP SSLMDWNPTA QSLLWEDSLD PDGSRSQSHR PHLPSPRRIL VSPLQVAENK 360 ARRRRARRWS SVEEETLRNG VEQFGSGNWK DILSHNPDVF IGRTQVDLKD KWRNMMR

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MPRLTPADAS LILDHVVGDA SIPTAAANVL LAGLPFPDRP TPRLLRSLLL RRLDTDPVSA  60
AALDSLQLLA SLPDSGPASP VSAAHLAVAA FLACSAPDFD AAARALFGRP GGRARRAVDE  120
EEGGDTALAS SEALAAADQF EAAVGNAFSQ DVLKGLFGDR AKAERRVRDL LAAEWAAIGP  180
SRLELAAEQI VGDGAVETWR AADETVRAKY RILAGEEKAR EILSRIEDRI STPQVHKVIH  240
DLKSRCADLH NVVDDPLPAA KAAADKVLAA RMDKAVHIND EELNNQAANC SVAGPSAVND  300
QGETLRKGTP SSLMDWNPTA QSLLWEDSLD PDGSRSQSHR PHLPSPRRIL VSPLQVAENK  360
ARRRRARRWS SVEEETLRNG VEQFGSGNWK DILSHNPDVF IGRTQVDLKD KWRNMMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	1e-14	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG007010.2