PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7BG004950.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | CO-like | ||||||||
Protein Properties | Length: 243aa MW: 25002.8 Da PI: 6.2631 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 19.2 | 2.5e-06 | 14 | 56 | 5 | 42 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ ++ + l+C + lC C + H+ H++vpl TRIDC7BG004950.2 14 PCAVCGGA-AALYCPADAAALCVPCDAAVHSAnplasrHERVPL 56 7******9.*********************66999999999986 PP | |||||||
2 | CCT | 66.3 | 8.3e-23 | 159 | 202 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+++++RY+eKrk+RkF+K+irY+sRKa+Ae RpR+KGrFvk++ TRIDC7BG004950.2 159 RAERVRRYREKRKNRKFQKTIRYASRKAYAEARPRIKGRFVKRP 202 99****************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MESEGSTSPN GGAPCAVCGG AAALYCPADA AALCVPCDAA VHSANPLASR HERVPLAAAV 60 AATSGVYDLF AADDEGGSSW PGQGSPSSGS SGFSNGGVVE MSLFDLLSDV DLVATGAGGS 120 MLSDGPLWLQ PGLAADASAA WTSSWSPAEA VVVPSAADRA ERVRRYREKR KNRKFQKTIR 180 YASRKAYAEA RPRIKGRFVK RPAAASVDDD NTSAAEAAAK FWLSFSDNSV GFQVASHGVV 240 PSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57660.1 | 5e-11 | CO-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7BG004950.2 |