PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7BG004670.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 355aa MW: 38876.6 Da PI: 7.6242

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7BG004670.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.6e-17	54	101	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed llv+ v+q+G g+W+++ r g+ R++k+c++rw ++l TRIDC7BG004670.3 54 KGPWTTAEDALLVNHVRQHGEGNWNAVQRITGLLRCGKSCRLRWTNHL 101 79****************************99*********996 PP
2	Myb_DNA-binding	50.3	5.7e-16	107	150	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++++E++l +++++qlG++ W++ a +++ gRt++++k++w++ TRIDC7BG004670.3 107 KGAFSPDEELLVAQLHAQLGNK-WARMATHLP-GRTDNEIKNYWNT 150 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
TTVSFYLRPS LAPPMATSLE EEQAAAAAAA DNLDEEVEQR EEGEEEATPV VLKKGPWTTA 60 EDALLVNHVR QHGEGNWNAV QRITGLLRCG KSCRLRWTNH LRPNLKKGAF SPDEELLVAQ 120 LHAQLGNKWA RMATHLPGRT DNEIKNYWNT RAKRRQRAGL PMYPPEVQLQ LAITKRCRYT 180 DFSPPQQSAG TNVLDATDAG YTSARPPPLD LAGQLAMANR PVQFLSQTPF SAPSSPWVKP 240 SFARNARFFQ FPHSSPVSPT TPELSLGHRL PGGDRTRFTP LSPSPGAKVE LPSNQLRPAS 300 PATATADNGG GLGEDQQNLE AMLQELHDAI KIEPPKHVSG HAEQNGASGE WCCRA

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

TTVSFYLRPS LAPPMATSLE EEQAAAAAAA DNLDEEVEQR EEGEEEATPV VLKKGPWTTA  60
EDALLVNHVR QHGEGNWNAV QRITGLLRCG KSCRLRWTNH LRPNLKKGAF SPDEELLVAQ  120
LHAQLGNKWA RMATHLPGRT DNEIKNYWNT RAKRRQRAGL PMYPPEVQLQ LAITKRCRYT  180
DFSPPQQSAG TNVLDATDAG YTSARPPPLD LAGQLAMANR PVQFLSQTPF SAPSSPWVKP  240
SFARNARFFQ FPHSSPVSPT TPELSLGHRL PGGDRTRFTP LSPSPGAKVE LPSNQLRPAS  300
PATATADNGG GLGEDQQNLE AMLQELHDAI KIEPPKHVSG HAEQNGASGE WCCRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.1	2e-67	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7BG004670.3